File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b6/fb217fb651149c3052e10963c9e499/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-3426e1u5 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:24:22,315 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:24:23,131 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:24:23,291 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:24:24,185 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:24:24,342 - cnv_pipe.batch.run_model - INFO - Processing cluster 1099 with 197 probes
2026-06-08 22:24:24,710 - cnv_pipe.batch.run_model.cluster1099 - INFO - Child process started for cluster 1099 with 197 probes
2026-06-08 22:25:20,638 - cnv_pipe.batch.run_model.cluster1099 - INFO - Child process finished cluster 1099. Wrote cluster_1099_samples.csv and cluster_1099_params.csv
2026-06-08 22:25:20,639 - cnv_pipe.batch.run_model - INFO - Cluster 1099 finished in 56.30 seconds. Status: SUCCESS