File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/74/06471a12d0467cdad4babeb52ce5d7/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-vca4aqu4 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:25:24,943 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:25:25,807 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:25:25,978 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:25:26,927 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:25:27,098 - cnv_pipe.batch.run_model - INFO - Processing cluster 1487 with 186 probes
2026-06-08 22:25:27,467 - cnv_pipe.batch.run_model.cluster1487 - INFO - Child process started for cluster 1487 with 186 probes
2026-06-08 22:26:24,726 - cnv_pipe.batch.run_model.cluster1487 - INFO - Child process finished cluster 1487. Wrote cluster_1487_samples.csv and cluster_1487_params.csv
2026-06-08 22:26:24,728 - cnv_pipe.batch.run_model - INFO - Cluster 1487 finished in 57.63 seconds. Status: SUCCESS