File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/52/860d5ce2037ff61ae97a9f18c1c4c9/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-35cuw6zl because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:25:08,408 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:25:09,185 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:25:09,352 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:25:10,197 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:25:10,260 - cnv_pipe.batch.run_model - INFO - Processing cluster 1386 with 194 probes
2026-06-08 22:25:10,715 - cnv_pipe.batch.run_model.cluster1386 - INFO - Child process started for cluster 1386 with 194 probes
2026-06-08 22:26:05,916 - cnv_pipe.batch.run_model.cluster1386 - INFO - Child process finished cluster 1386. Wrote cluster_1386_samples.csv and cluster_1386_params.csv
2026-06-08 22:26:05,917 - cnv_pipe.batch.run_model - INFO - Cluster 1386 finished in 55.66 seconds. Status: SUCCESS