File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a9/cf1f524a620f4f75e79c0a33e43670/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-oir0asra because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:22:21,920 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:22:22,758 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:22:22,927 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:22:24,012 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:22:24,083 - cnv_pipe.batch.run_model - INFO - Processing cluster 402 with 160 probes
2026-06-08 22:22:24,461 - cnv_pipe.batch.run_model.cluster402 - INFO - Child process started for cluster 402 with 160 probes
2026-06-08 22:23:13,522 - cnv_pipe.batch.run_model.cluster402 - INFO - Child process finished cluster 402. Wrote cluster_402_samples.csv and cluster_402_params.csv
2026-06-08 22:23:13,523 - cnv_pipe.batch.run_model - INFO - Cluster 402 finished in 49.44 seconds. Status: SUCCESS