File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/09/06d2c6f7f8ba6cc33ea5b7c5f69f3a/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-r5uc8itc because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:24:58,837 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:24:59,647 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:24:59,813 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:25:00,707 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:25:00,861 - cnv_pipe.batch.run_model - INFO - Processing cluster 1330 with 152 probes
2026-06-08 22:25:01,244 - cnv_pipe.batch.run_model.cluster1330 - INFO - Child process started for cluster 1330 with 152 probes
2026-06-08 22:25:46,079 - cnv_pipe.batch.run_model.cluster1330 - INFO - Child process finished cluster 1330. Wrote cluster_1330_samples.csv and cluster_1330_params.csv
2026-06-08 22:25:46,080 - cnv_pipe.batch.run_model - INFO - Cluster 1330 finished in 45.22 seconds. Status: SUCCESS