File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5e/5e62c44828ca7a211a8e62cc2b3d81/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-h4lgsjfn because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:24:07,253 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:24:08,052 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:24:08,222 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:24:09,098 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:24:09,267 - cnv_pipe.batch.run_model - INFO - Processing cluster 991 with 184 probes
2026-06-08 22:24:09,632 - cnv_pipe.batch.run_model.cluster991 - INFO - Child process started for cluster 991 with 184 probes
2026-06-08 22:25:03,885 - cnv_pipe.batch.run_model.cluster991 - INFO - Child process finished cluster 991. Wrote cluster_991_samples.csv and cluster_991_params.csv
2026-06-08 22:25:03,886 - cnv_pipe.batch.run_model - INFO - Cluster 991 finished in 54.62 seconds. Status: SUCCESS