File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9f/31a1fb2a145d34fd0840de9e51a4b1/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-4atl_sb1 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:22:50,330 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:22:51,201 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:22:51,373 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:22:52,529 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:22:52,597 - cnv_pipe.batch.run_model - INFO - Processing cluster 390 with 187 probes
2026-06-08 22:22:52,976 - cnv_pipe.batch.run_model.cluster390 - INFO - Child process started for cluster 390 with 187 probes
2026-06-08 22:23:49,570 - cnv_pipe.batch.run_model.cluster390 - INFO - Child process finished cluster 390. Wrote cluster_390_samples.csv and cluster_390_params.csv
2026-06-08 22:23:49,571 - cnv_pipe.batch.run_model - INFO - Cluster 390 finished in 56.97 seconds. Status: SUCCESS