File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ad/552cf6d2c13c1eb2692415a1e13916/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-qp356lb5 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:24:31,148 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:24:32,001 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:24:32,173 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:24:33,140 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:24:33,221 - cnv_pipe.batch.run_model - INFO - Processing cluster 1057 with 185 probes
2026-06-08 22:24:33,679 - cnv_pipe.batch.run_model.cluster1057 - INFO - Child process started for cluster 1057 with 185 probes
2026-06-08 22:25:30,418 - cnv_pipe.batch.run_model.cluster1057 - INFO - Child process finished cluster 1057. Wrote cluster_1057_samples.csv and cluster_1057_params.csv
2026-06-08 22:25:30,419 - cnv_pipe.batch.run_model - INFO - Cluster 1057 finished in 57.20 seconds. Status: SUCCESS