File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/35/b772362cc81c9897757d890dd9a1a6/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-163wkwd8 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:23:36,481 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:23:37,297 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:23:37,465 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:23:38,406 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:23:38,564 - cnv_pipe.batch.run_model - INFO - Processing cluster 855 with 191 probes
2026-06-08 22:23:38,945 - cnv_pipe.batch.run_model.cluster855 - INFO - Child process started for cluster 855 with 191 probes
2026-06-08 22:24:35,617 - cnv_pipe.batch.run_model.cluster855 - INFO - Child process finished cluster 855. Wrote cluster_855_samples.csv and cluster_855_params.csv
2026-06-08 22:24:35,618 - cnv_pipe.batch.run_model - INFO - Cluster 855 finished in 57.05 seconds. Status: SUCCESS