File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/af/3017ee1364a1301081d66a33f8b126/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-im3_sf8i because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:25:21,926 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:25:22,818 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:25:22,996 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:25:24,000 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:25:24,165 - cnv_pipe.batch.run_model - INFO - Processing cluster 1471 with 157 probes
2026-06-08 22:25:24,545 - cnv_pipe.batch.run_model.cluster1471 - INFO - Child process started for cluster 1471 with 157 probes
2026-06-08 22:26:14,518 - cnv_pipe.batch.run_model.cluster1471 - INFO - Child process finished cluster 1471. Wrote cluster_1471_samples.csv and cluster_1471_params.csv
2026-06-08 22:26:14,520 - cnv_pipe.batch.run_model - INFO - Cluster 1471 finished in 50.35 seconds. Status: SUCCESS