File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/66/bb2848b66a196b6e90a268aa27f211/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-fd88pqzf because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:24:23,273 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:24:24,126 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:24:24,301 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:24:25,333 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:24:25,405 - cnv_pipe.batch.run_model - INFO - Processing cluster 1102 with 197 probes
2026-06-08 22:24:25,787 - cnv_pipe.batch.run_model.cluster1102 - INFO - Child process started for cluster 1102 with 197 probes
2026-06-08 22:25:21,898 - cnv_pipe.batch.run_model.cluster1102 - INFO - Child process finished cluster 1102. Wrote cluster_1102_samples.csv and cluster_1102_params.csv
2026-06-08 22:25:21,899 - cnv_pipe.batch.run_model - INFO - Cluster 1102 finished in 56.49 seconds. Status: SUCCESS