#!/bin/bash -Ceuo pipefail bgzip --threads 1 -c germline_control_2.vcf > germline_control_2.vcf.gz tabix --threads 1 germline_control_2.vcf.gz cat <<-END_VERSIONS > versions.yml "DAQ:CONTROL_VARIANT_CALLING:CONTROL_GERMLINE_VC:BGZIPTABIX_GERMLINE_CNV": tabix: $(echo $(tabix -h 2>&1) | sed 's/^.*Version: //; s/ .*$//') END_VERSIONS