File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4c/5de9c810a77948e4f07d6365a97ba4/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-_0it2ryk because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:25:08,014 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:25:08,794 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:25:08,961 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:25:09,860 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:25:10,010 - cnv_pipe.batch.run_model - INFO - Processing cluster 1384 with 125 probes
2026-06-08 22:25:10,373 - cnv_pipe.batch.run_model.cluster1384 - INFO - Child process started for cluster 1384 with 125 probes
2026-06-08 22:25:50,072 - cnv_pipe.batch.run_model.cluster1384 - INFO - Child process finished cluster 1384. Wrote cluster_1384_samples.csv and cluster_1384_params.csv
2026-06-08 22:25:50,074 - cnv_pipe.batch.run_model - INFO - Cluster 1384 finished in 40.06 seconds. Status: SUCCESS