File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/a1/447a7e837cebc96f5adfc382d73f5d/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-6jaixra_ because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:23:17,090 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:23:18,045 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:23:18,239 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:23:19,325 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:23:19,487 - cnv_pipe.batch.run_model - INFO - Processing cluster 726 with 157 probes
2026-06-08 22:23:19,943 - cnv_pipe.batch.run_model.cluster726 - INFO - Child process started for cluster 726 with 157 probes
2026-06-08 22:24:15,513 - cnv_pipe.batch.run_model.cluster726 - INFO - Child process finished cluster 726. Wrote cluster_726_samples.csv and cluster_726_params.csv
2026-06-08 22:24:15,514 - cnv_pipe.batch.run_model - INFO - Cluster 726 finished in 56.03 seconds. Status: SUCCESS