File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/9e/921d1d4d3eaeea5f19cf1605780824/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-6jrgu05e because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:24:03,365 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:24:04,211 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:24:04,389 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:24:05,316 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:24:05,516 - cnv_pipe.batch.run_model - INFO - Processing cluster 972 with 173 probes
2026-06-08 22:24:05,902 - cnv_pipe.batch.run_model.cluster972 - INFO - Child process started for cluster 972 with 173 probes
2026-06-08 22:24:56,793 - cnv_pipe.batch.run_model.cluster972 - INFO - Child process finished cluster 972. Wrote cluster_972_samples.csv and cluster_972_params.csv
2026-06-08 22:24:56,794 - cnv_pipe.batch.run_model - INFO - Cluster 972 finished in 51.28 seconds. Status: SUCCESS