mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-brmd7wbg because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:22:39,808 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:22:40,701 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:22:40,880 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:22:42,050 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:22:42,125 - cnv_pipe.batch.run_model - INFO - Processing cluster 100 with 178 probes
2026-06-08 22:22:42,523 - cnv_pipe.batch.run_model.cluster100 - INFO - Child process started for cluster 100 with 178 probes
2026-06-08 22:23:36,870 - cnv_pipe.batch.run_model.cluster100 - INFO - Child process finished cluster 100. Wrote cluster_100_samples.csv and cluster_100_params.csv
2026-06-08 22:23:36,871 - cnv_pipe.batch.run_model - INFO - Cluster 100 finished in 54.75 seconds. Status: SUCCESS