File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/0a/f47ffe9a0decff717006c86f92a946/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-3xq5diki because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:25:10,812 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:25:11,599 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:25:11,771 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:25:12,682 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:25:12,884 - cnv_pipe.batch.run_model - INFO - Processing cluster 1400 with 196 probes
2026-06-08 22:25:13,259 - cnv_pipe.batch.run_model.cluster1400 - INFO - Child process started for cluster 1400 with 196 probes
2026-06-08 22:26:11,797 - cnv_pipe.batch.run_model.cluster1400 - INFO - Child process finished cluster 1400. Wrote cluster_1400_samples.csv and cluster_1400_params.csv
2026-06-08 22:26:11,798 - cnv_pipe.batch.run_model - INFO - Cluster 1400 finished in 58.91 seconds. Status: SUCCESS