cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_tumor.md.bam --algo HsMetricAlgo --targets_list targets/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity_footprint.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed HCC1395_tumor_xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity_footprint.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:166000001, elapsed 0.0s, est remaining 0.5s, peak mem 118MB, user 0.1s, sys 0.4s, output queue size 1
progress 10% @chr2:69000001, elapsed 0.0s, est remaining 0.4s, peak mem 118MB, user 0.1s, sys 1.0s, output queue size 4
progress 15% @chr2:231000001, elapsed 0.1s, est remaining 0.4s, peak mem 118MB, user 0.2s, sys 1.6s, output queue size 4
progress 20% @chr3:151000001, elapsed 0.1s, est remaining 0.4s, peak mem 118MB, user 0.3s, sys 2.3s, output queue size 3
progress 25% @chr4:116000001, elapsed 0.1s, est remaining 0.4s, peak mem 118MB, user 0.3s, sys 2.9s, output queue size 7
progress 30% @chr5:85000001, elapsed 0.1s, est remaining 0.3s, peak mem 118MB, user 0.4s, sys 3.5s, output queue size 2
progress 35% @chr6:60000001, elapsed 0.2s, est remaining 0.3s, peak mem 118MB, user 0.5s, sys 4.2s, output queue size 5
progress 40% @chr7:53000001, elapsed 0.2s, est remaining 0.3s, peak mem 118MB, user 0.5s, sys 4.8s, output queue size 4
progress 45% @chr8:67000001, elapsed 0.2s, est remaining 0.3s, peak mem 118MB, user 0.6s, sys 5.5s, output queue size 2
progress 50% @chr9:84000001, elapsed 0.2s, est remaining 0.2s, peak mem 118MB, user 0.7s, sys 6.1s, output queue size 2
progress 55% @chr10:96000001, elapsed 0.3s, est remaining 0.2s, peak mem 118MB, user 0.7s, sys 6.7s, output queue size 4
progress 60% @chr11:121000001, elapsed 0.3s, est remaining 0.2s, peak mem 118MB, user 0.8s, sys 7.4s, output queue size 3
progress 65% @chr13:17000001, elapsed 0.3s, est remaining 0.2s, peak mem 118MB, user 0.9s, sys 8.1s, output queue size 2
progress 70% @chr14:59000001, elapsed 0.3s, est remaining 0.1s, peak mem 118MB, user 0.9s, sys 8.7s, output queue size 3
progress 75% @chr16:9000001, elapsed 0.4s, est remaining 0.1s, peak mem 118MB, user 1.0s, sys 9.3s, output queue size 4
progress 80% @chr17:80000001, elapsed 0.4s, est remaining 0.1s, peak mem 118MB, user 1.0s, sys 10.0s, output queue size 5
progress 85% @chr20:18000001, elapsed 0.4s, est remaining 0.1s, peak mem 118MB, user 1.1s, sys 10.6s, output queue size 7
progress 90% @chrX:40000001, elapsed 0.4s, est remaining 0.0s, peak mem 144MB, user 1.4s, sys 11.0s, output queue size 114
progress 95% @chrY:36000001, elapsed 0.5s, est remaining 0.0s, peak mem 160MB, user 1.9s, sys 11.5s, output queue size 276
progress 100% @chr21:41000001, elapsed 1.1s, est remaining 0.0s, peak mem 186MB, user 4.0s, sys 12.1s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000c06f2
  features: 1f8bfbff fffab20b
  extended: f1bf07ab 1a407f7e
  amd bits: 2c100800 00000121
     brand: Intel(R) Xeon(R) Platinum 8559C
threads: 31 max 192
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 50813903
reads: 1001320
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.503 user 6.168 sys 7.763 real
done: 1 calls 0.014 user 0.000 sys 0.015 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.007 user 0.003 sys 1.087 real
idle: 82 calls 0.010 user 0.020 sys 47.531 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 196894720 mem 4.613 user 12.832 sys 2.743 real