mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-nqhiatrp because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:22:18,045 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:22:18,912 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:22:19,084 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:22:20,010 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:22:20,173 - cnv_pipe.batch.run_model - INFO - Processing cluster 375 with 165 probes
2026-06-08 22:22:20,547 - cnv_pipe.batch.run_model.cluster375 - INFO - Child process started for cluster 375 with 165 probes
2026-06-08 22:23:09,960 - cnv_pipe.batch.run_model.cluster375 - INFO - Child process finished cluster 375. Wrote cluster_375_samples.csv and cluster_375_params.csv
2026-06-08 22:23:09,962 - cnv_pipe.batch.run_model - INFO - Cluster 375 finished in 49.79 seconds. Status: SUCCESS