Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7e/93023e04c786dafb20d75b71a2d0d1/negative_somatic_control_1.snv_indel.phased.vep.vcf.gz
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e2/477be2e4b3da5ac79b6a346575911d/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/e2/477be2e4b3da5ac79b6a346575911d/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/hotspots/hotspot_definitions.tsv
==> STAGING COMPLETE (4 inputs)

Loaded 73 hotspot definitions
Processed 144 variants, labeled 0 as HOTSPOT