Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/67/1acbd40094ddb596d3ed0f6a7d0bdf/negative_somatic_control_1.snv_indel.phased.vcf.gz Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7e/93023e04c786dafb20d75b71a2d0d1/.command.sh Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7e/93023e04c786dafb20d75b71a2d0d1/.command.run Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/annotation-cache/vep_cache/113_GRCh38 ==> STAGING COMPLETE (5 inputs) ls: *.tab.gz: No such file or directory ls: *.json.gz: No such file or directory