File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/91/96690a5ac6cdff8256d2628693cf82/.command.err
Size
100.5 KB
Task
DAQ:CONTROL_VARIANT_CALLING:CONTROL_SOMATIC_VC:BAM_VARIANT_CALLING_SOMATIC_STRELKA:STRELKA_SOMATIC (positive_somatic_control_1;chr6_138229684-138229952.bed)
Attempt

Content

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[2026-06-08T22:19:22.782104Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-08T22:19:22.858752Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-08T22:19:22.858808Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-08T22:19:22.858815Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-08T22:19:22.858821Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXQYuTZe'
[2026-06-08T22:19:22.858826Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-08T22:19:22.858832Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-08T22:19:22.858836Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-08T22:19:22.858840Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] [RunParameters] memMb: 3047507
[2026-06-08T22:19:22.858844Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-08T22:19:22.858848Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-08T22:19:22.858852Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-08T22:19:22.858856Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-08T22:19:22.858884Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-08T22:19:22.859471Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-08T22:19:22.859585Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-08T22:19:22.865791Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-08T22:19:22.866654Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-08T22:19:22.866993Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-08T22:19:22.867265Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-08T22:19:22.867578Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.868413Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.868520Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.868598Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.868945Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.869242Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.869354Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-08T22:19:22.869687Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.869775Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.870176Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.870476Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.871364Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.871690Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.873509Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.873767Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-08T22:19:22.874018Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.874321Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.874593Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.874715Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.874780Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.874968Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.875035Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.875147Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.875215Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.875322Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.875385Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.875497Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.875561Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.876122Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.876216Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.876335Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.876406Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.876572Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.876669Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.876782Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.876846Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.876957Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.877023Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.877135Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.877228Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.877744Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.877969Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.878083Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.878147Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.878254Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.878316Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.878429Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.878492Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.878658Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.878724Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.878829Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.878893Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.879150Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.879568Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.879686Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.879750Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.879860Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.879924Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.880031Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.880094Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.880220Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.880284Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.880396Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.880463Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.880566Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.880766Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.881458Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.881524Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.881636Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.881700Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.881807Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.881869Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.881978Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.882042Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.884172Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.884633Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.884763Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.884836Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.884947Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.885014Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.885124Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.885186Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.885297Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.885359Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.885467Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.885533Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.885701Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.886696Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.886838Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.886909Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.887026Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.887097Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.887206Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.887271Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.887386Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.887448Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.887567Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.887629Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.888215Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.889146Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.889320Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.889386Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.889499Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.889564Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.889676Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.889746Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.889857Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.889924Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.890036Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.890100Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.894013Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.894097Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.894366Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.894461Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.906135Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.906231Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.906307Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.906496Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.906572Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.906670Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.906737Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.906869Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.906935Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-08T22:19:22.906981Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-08T22:19:22.917862Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:22.918735Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:19:22.919161Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-08T22:19:22.920184Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:19:22.921352Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:19:22.922458Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-08T22:19:22.923595Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-08T22:19:22.924939Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:19:22.926171Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:19:22.930235Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0014] Task initiated on local node
[2026-06-08T22:19:22.936237Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0002] Task initiated on local node
[2026-06-08T22:19:22.938363Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0009] Task initiated on local node
[2026-06-08T22:19:22.939454Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0009] Task initiated on local node
[2026-06-08T22:19:22.941974Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0012] Task initiated on local node
[2026-06-08T22:19:22.944868Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0003] Task initiated on local node
[2026-06-08T22:19:22.946345Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0010] Task initiated on local node
[2026-06-08T22:19:22.947024Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0004] Task initiated on local node
[2026-06-08T22:19:23.045433Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:23.046854Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:19:23.050185Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0002] Task initiated on local node
[2026-06-08T22:19:24.013758Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:24.013856Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:24.014995Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:19:24.015715Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:19:24.019263Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0005] Task initiated on local node
[2026-06-08T22:19:24.020451Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0007] Task initiated on local node
[2026-06-08T22:19:24.080287Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:24.081565Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:19:24.084853Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0004] Task initiated on local node
[2026-06-08T22:19:24.296596Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:24.297702Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:24.300778Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0000] Task initiated on local node
[2026-06-08T22:19:24.330118Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:24.331339Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:19:24.334455Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0005] Task initiated on local node
[2026-06-08T22:19:24.796858Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:24.798133Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-08T22:19:24.801459Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0011] Task initiated on local node
[2026-06-08T22:19:24.862577Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:24.862678Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:24.863951Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:24.864607Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-08T22:19:24.869614Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-08T22:19:24.869897Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0010] Task initiated on local node
[2026-06-08T22:19:24.873392Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:24.874602Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-08T22:19:24.877657Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0012] Task initiated on local node
[2026-06-08T22:19:24.939402Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:24.940772Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:19:24.944127Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0009] Task initiated on local node
[2026-06-08T22:19:25.005474Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.005557Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.006664Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.006995Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.010598Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0010] Task initiated on local node
[2026-06-08T22:19:25.011666Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0005] Task initiated on local node
[2026-06-08T22:19:25.071601Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.071671Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.072738Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.073100Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.077067Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0006] Task initiated on local node
[2026-06-08T22:19:25.078760Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0003] Task initiated on local node
[2026-06-08T22:19:25.187925Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.188024Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.189159Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.189508Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.192914Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0009] Task initiated on local node
[2026-06-08T22:19:25.234416Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0003] Task initiated on local node
[2026-06-08T22:19:25.253916Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.253998Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.255093Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.255483Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.259161Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0001] Task initiated on local node
[2026-06-08T22:19:25.260538Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0011] Task initiated on local node
[2026-06-08T22:19:25.320552Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.322010Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.326239Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0006] Task initiated on local node
[2026-06-08T22:19:25.436785Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.437844Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.441383Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0012] Task initiated on local node
[2026-06-08T22:19:25.552587Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.554256Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.557617Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0007] Task initiated on local node
[2026-06-08T22:19:25.618686Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.620050Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.623466Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0011] Task initiated on local node
[2026-06-08T22:19:25.735021Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.736101Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.750894Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0012] Task initiated on local node
[2026-06-08T22:19:25.779657Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.780770Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.784222Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0006] Task initiated on local node
[2026-06-08T22:19:25.788603Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.789496Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.792661Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0001] Task initiated on local node
[2026-06-08T22:19:25.854196Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.854350Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.855750Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.856231Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.859992Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0006] Task initiated on local node
[2026-06-08T22:19:25.861520Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0006] Task initiated on local node
[2026-06-08T22:19:25.921479Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.923247Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.926931Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0002] Task initiated on local node
[2026-06-08T22:19:25.988121Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.989839Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.993459Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0013] Task initiated on local node
[2026-06-08T22:19:26.656695Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.656833Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.658109Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.658851Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.663355Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0006] Task initiated on local node
[2026-06-08T22:19:26.664771Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0013] Task initiated on local node
[2026-06-08T22:19:26.724528Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.725873Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.729868Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0009] Task initiated on local node
[2026-06-08T22:19:26.891445Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.892863Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.897411Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0004] Task initiated on local node
[2026-06-08T22:19:27.008327Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.008425Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.009658Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.010113Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.013955Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0012] Task initiated on local node
[2026-06-08T22:19:27.015227Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0007] Task initiated on local node
[2026-06-08T22:19:27.075385Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.076559Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.080338Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0011] Task initiated on local node
[2026-06-08T22:19:27.109516Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.110809Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.114478Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0012] Task initiated on local node
[2026-06-08T22:19:27.175783Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0012' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.176968Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.184223Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0014] Task initiated on local node
[2026-06-08T22:19:27.245450Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0014' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.246556Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.250669Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0005] Task initiated on local node
[2026-06-08T22:19:27.311279Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.312425Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.316077Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0002] Task initiated on local node
[2026-06-08T22:19:27.377833Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.379098Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.382729Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0004] Task initiated on local node
[2026-06-08T22:19:27.445564Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.445712Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.447125Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.447606Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.451215Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0006] Task initiated on local node
[2026-06-08T22:19:27.452311Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0000] Task initiated on local node
[2026-06-08T22:19:27.512477Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.512565Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.513521Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.514391Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.519054Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0010] Task initiated on local node
[2026-06-08T22:19:27.523962Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0000] Task initiated on local node
[2026-06-08T22:19:27.579449Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.580530Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.584749Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0001] Task initiated on local node
[2026-06-08T22:19:27.645676Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.646797Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.651015Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0010] Task initiated on local node
[2026-06-08T22:19:27.711920Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.713125Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.716766Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0004] Task initiated on local node
[2026-06-08T22:19:27.777805Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.778908Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.783111Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0010] Task initiated on local node
[2026-06-08T22:19:27.894152Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.894255Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.895445Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.896233Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.900634Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0004] Task initiated on local node
[2026-06-08T22:19:27.933951Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0003] Task initiated on local node
[2026-06-08T22:19:27.961420Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.962761Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.966526Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0008] Task initiated on local node
[2026-06-08T22:19:28.078047Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.078145Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.079277Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.079718Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.083417Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0007] Task initiated on local node
[2026-06-08T22:19:28.085166Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0010] Task initiated on local node
[2026-06-08T22:19:28.145039Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.145191Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.146219Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.147044Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.152535Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0007] Task initiated on local node
[2026-06-08T22:19:28.154746Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0009] Task initiated on local node
[2026-06-08T22:19:28.464252Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.465775Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.471424Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000] Task initiated on local node
[2026-06-08T22:19:28.580671Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_444_chr6_GL000254v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.581749Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.585546Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0001] Task initiated on local node
[2026-06-08T22:19:28.696820Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.697747Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.701373Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0008] Task initiated on local node
[2026-06-08T22:19:28.762405Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.763506Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.767774Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0008] Task initiated on local node
[2026-06-08T22:19:29.029548Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.031131Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.034889Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0011] Task initiated on local node
[2026-06-08T22:19:29.096265Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.097651Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.101548Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0011] Task initiated on local node
[2026-06-08T22:19:29.162644Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.164591Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.168513Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0001] Task initiated on local node
[2026-06-08T22:19:29.279831Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.281790Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.282389Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.283785Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.287488Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0001] Task initiated on local node
[2026-06-08T22:19:29.288473Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0010] Task initiated on local node
[2026-06-08T22:19:29.316538Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.317679Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.321135Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0003] Task initiated on local node
[2026-06-08T22:19:29.350186Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.350275Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.351170Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.351565Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.355336Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.356315Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0000] Task initiated on local node
[2026-06-08T22:19:29.359499Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.359887Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0009] Task initiated on local node
[2026-06-08T22:19:29.363509Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0001] Task initiated on local node
[2026-06-08T22:19:29.368039Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.368863Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.372371Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0005] Task initiated on local node
[2026-06-08T22:19:29.401313Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.401425Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.401479Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.402658Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.403100Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.404450Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.408843Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0009] Task initiated on local node
[2026-06-08T22:19:29.410762Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0005] Task initiated on local node
[2026-06-08T22:19:29.412741Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0002] Task initiated on local node
[2026-06-08T22:19:29.469959Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.470859Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.475624Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0000] Task initiated on local node
[2026-06-08T22:19:29.480039Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.480851Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.484310Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0007] Task initiated on local node
[2026-06-08T22:19:29.545501Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.546641Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.549466Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.550420Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.550880Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0003] Task initiated on local node
[2026-06-08T22:19:29.554933Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_006_chr7_0000] Task initiated on local node
[2026-06-08T22:19:29.665869Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.666801Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.670852Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0007] Task initiated on local node
[2026-06-08T22:19:29.732057Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.732982Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.736954Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0008] Task initiated on local node
[2026-06-08T22:19:29.848007Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.848883Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.852478Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0003] Task initiated on local node
[2026-06-08T22:19:29.913401Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.914317Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.918049Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0005] Task initiated on local node
[2026-06-08T22:19:29.978996Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.979847Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.983726Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0007] Task initiated on local node
[2026-06-08T22:19:29.984033Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.984621Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.988781Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0002] Task initiated on local node
[2026-06-08T22:19:30.049101Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.049222Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.050003Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.050396Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.054233Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0013] Task initiated on local node
[2026-06-08T22:19:30.055499Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_007_chr8_0011] Task initiated on local node
[2026-06-08T22:19:30.066917Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.067589Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.070612Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0002] Task initiated on local node
[2026-06-08T22:19:30.131800Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0013' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.131899Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.132694Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.133038Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.136927Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0013] Task initiated on local node
[2026-06-08T22:19:30.137962Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_005_chr6_0004] Task initiated on local node
[2026-06-08T22:19:30.198090Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0013' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.198906Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.202554Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_008_chr9_0008] Task initiated on local node
[2026-06-08T22:19:30.215332Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.216120Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.219463Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0004] Task initiated on local node
[2026-06-08T22:19:30.280628Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.281466Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.285149Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_005_chr6_0000] Task initiated on local node
[2026-06-08T22:19:30.346163Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.346891Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.350547Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_005_chr6_0000] Task initiated on local node
[2026-06-08T22:19:30.411752Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_005_chr6_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.412602Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.416749Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-08T22:19:30.527929Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.528697Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.532723Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000] Task initiated on local node
[2026-06-08T22:19:30.593761Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_398_chr6_GL000251v2_alt_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.594562Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.598479Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0005] Task initiated on local node
[2026-06-08T22:19:30.659388Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.660177Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.664244Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0006] Task initiated on local node
[2026-06-08T22:19:30.725114Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.725853Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.729688Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0001] Task initiated on local node
[2026-06-08T22:19:30.790817Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.256454Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.257312Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.260888Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0002] Task initiated on local node
[2026-06-08T22:19:31.265774Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.266621Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.269864Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0003] Task initiated on local node
[2026-06-08T22:19:31.299127Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.331550Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.446305Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.446424Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.447028Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.447533Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.451157Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0011] Task initiated on local node
[2026-06-08T22:19:31.452615Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0000] Task initiated on local node
[2026-06-08T22:19:31.512414Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.512516Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.927888Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.928821Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.932211Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_007_chr8_0008] Task initiated on local node
[2026-06-08T22:19:31.993512Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_007_chr8_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.158227Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.159020Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.162264Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_006_chr7_0008] Task initiated on local node
[2026-06-08T22:19:32.191501Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.192896Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.193300Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_006_chr7_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.197467Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_008_chr9_0008] Task initiated on local node
[2026-06-08T22:19:32.258698Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_008_chr9_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.259106Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.259291Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.259625Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.260340Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.266240Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-08T22:19:32.267519Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-08T22:19:32.268539Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-08T22:19:32.325196Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.325271Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.325294Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.325522Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.325860Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.329872Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-08T22:19:32.331034Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-08T22:19:32.390934Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.391015Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.391233Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.394455Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-08T22:19:32.455858Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.473128Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-08T22:19:41.747539Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-08T22:19:41.747539Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] 
[2026-06-08T22:19:41.747539Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-08T22:19:41.747669Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] 
[2026-06-08T22:19:41.747679Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-08T22:19:41.747687Z] [nf-9196690a5ac6cdff8256d2628693cf82-e327e-ngjb4] [649_1] [WorkflowRunner] Elapsed time for full workflow: 18 sec