File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/74/92b861ed67639881ff814109465317/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-6fjuslh0 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:24:03,994 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:24:04,782 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:24:04,951 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:24:05,895 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:24:06,042 - cnv_pipe.batch.run_model - INFO - Processing cluster 948 with 199 probes
2026-06-08 22:24:06,420 - cnv_pipe.batch.run_model.cluster948 - INFO - Child process started for cluster 948 with 199 probes
2026-06-08 22:25:05,014 - cnv_pipe.batch.run_model.cluster948 - INFO - Child process finished cluster 948. Wrote cluster_948_samples.csv and cluster_948_params.csv
2026-06-08 22:25:05,015 - cnv_pipe.batch.run_model - INFO - Cluster 948 finished in 58.97 seconds. Status: SUCCESS