File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/b7/c7706a22772047cf406f7725c8a452/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-21mjaykw because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:24:33,438 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:24:34,315 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:24:34,491 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:24:35,520 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:24:35,688 - cnv_pipe.batch.run_model - INFO - Processing cluster 1063 with 190 probes
2026-06-08 22:24:36,085 - cnv_pipe.batch.run_model.cluster1063 - INFO - Child process started for cluster 1063 with 190 probes
2026-06-08 22:25:32,735 - cnv_pipe.batch.run_model.cluster1063 - INFO - Child process finished cluster 1063. Wrote cluster_1063_samples.csv and cluster_1063_params.csv
2026-06-08 22:25:32,736 - cnv_pipe.batch.run_model - INFO - Cluster 1063 finished in 57.05 seconds. Status: SUCCESS