File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/18/87b2c98b0ed806f930536b0a3c1ad3/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-g15a_q9x because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:23:35,230 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:23:36,030 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:23:36,201 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:23:37,325 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:23:37,400 - cnv_pipe.batch.run_model - INFO - Processing cluster 595 with 183 probes
2026-06-08 22:23:37,780 - cnv_pipe.batch.run_model.cluster595 - INFO - Child process started for cluster 595 with 183 probes
2026-06-08 22:24:34,967 - cnv_pipe.batch.run_model.cluster595 - INFO - Child process finished cluster 595. Wrote cluster_595_samples.csv and cluster_595_params.csv
2026-06-08 22:24:34,968 - cnv_pipe.batch.run_model - INFO - Cluster 595 finished in 57.57 seconds. Status: SUCCESS