Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d4/d6619eb3626fc89f9d868e5113ea16/.command.sh
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr12_102480219-102480663.bed.gz
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/d4/d6619eb3626fc89f9d868e5113ea16/.command.run
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/03/b9327ccd07f95c93afdb2eed727086/Sig_18_Blood.recalibrated.bam.bai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr12_102480219-102480663.bed.gz.tbi
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/03/b9327ccd07f95c93afdb2eed727086/Sig_18_Blood.recalibrated.bam
==> STAGING COMPLETE (10 inputs)


Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:

/var/tmp/strelka/runWorkflow.py
[2026-06-08T22:19:26.803098Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-08T22:19:26.806528Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-08T22:19:26.806556Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-08T22:19:26.806564Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-08T22:19:26.806571Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXX9B9QvV'
[2026-06-08T22:19:26.806578Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-08T22:19:26.806587Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-08T22:19:26.806592Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-08T22:19:26.806597Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] [RunParameters] memMb: 1523801
[2026-06-08T22:19:26.806603Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-08T22:19:26.806608Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-08T22:19:26.806613Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-08T22:19:26.806619Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-08T22:19:26.806624Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-08T22:19:26.807171Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-08T22:19:26.807308Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-08T22:19:26.814993Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-08T22:19:26.815844Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-08T22:19:26.816159Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-08T22:19:26.816395Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-08T22:19:26.816621Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.817618Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.817948Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.818043Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.818237Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.818654Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.818973Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.819413Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.819727Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.821765Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.822130Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.822215Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-08T22:19:26.822560Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.822642Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.822785Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.822870Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.823071Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.823156Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.823295Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.823372Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.823884Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.824077Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.824281Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.824609Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.824753Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.824828Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.824975Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.825065Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.825202Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.825281Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.825420Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.825527Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.825777Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.826189Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.826334Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.826414Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.826551Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.826630Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.826767Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.826846Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.826987Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.827065Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.827211Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.827394Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.827948Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.828031Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.828206Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.828365Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.828513Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.828597Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.828737Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.828816Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.829182Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.829751Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.829994Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.830097Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.830252Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.830347Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.830490Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.830574Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.830757Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.830911Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.831591Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.831672Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.831812Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.831899Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.832040Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.832120Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.832258Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.832345Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.832488Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.832790Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.833576Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.833673Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.835778Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.836563Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.836766Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.836861Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.837009Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.837095Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.837244Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.837324Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.837483Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.837655Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.838572Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.838690Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.838850Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.838981Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.839128Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.839242Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.839402Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.839701Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.840687Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.840807Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.841042Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.841130Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.841284Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.841368Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.859024Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.859507Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.859605Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.859969Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.860067Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.860198Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.860287Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.860448Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.860815Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-08T22:19:26.861947Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-08T22:19:26.862128Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.863192Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.863822Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.864319Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.864917Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.865614Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.866707Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.867633Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.869123Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.872868Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0003] Task initiated on local node
[2026-06-08T22:19:26.877729Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0007] Task initiated on local node
[2026-06-08T22:19:26.881086Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0004] Task initiated on local node
[2026-06-08T22:19:26.886343Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0007] Task initiated on local node
[2026-06-08T22:19:26.887170Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0000] Task initiated on local node
[2026-06-08T22:19:26.891814Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0002] Task initiated on local node
[2026-06-08T22:19:26.895121Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0001] Task initiated on local node
[2026-06-08T22:19:26.987511Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.987604Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.987863Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.989000Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.989609Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.990419Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.996469Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0007] Task initiated on local node
[2026-06-08T22:19:26.998680Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0004] Task initiated on local node
[2026-06-08T22:19:27.000006Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0007] Task initiated on local node
[2026-06-08T22:19:27.056463Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.057867Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.062933Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0000] Task initiated on local node
[2026-06-08T22:19:27.091083Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.091172Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.092475Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.092713Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.097632Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.098256Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0009] Task initiated on local node
[2026-06-08T22:19:27.098731Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0011] Task initiated on local node
[2026-06-08T22:19:27.100372Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.103439Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0000] Task initiated on local node
[2026-06-08T22:19:27.214579Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.215988Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.219619Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0009] Task initiated on local node
[2026-06-08T22:19:29.184735Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.186098Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.189571Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0000] Task initiated on local node
[2026-06-08T22:19:29.251635Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.252917Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.256235Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0004] Task initiated on local node
[2026-06-08T22:19:29.517898Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.519835Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.523181Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0000] Task initiated on local node
[2026-06-08T22:19:29.634391Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.634479Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.635639Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.635979Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.639454Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0009] Task initiated on local node
[2026-06-08T22:19:29.640503Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0006] Task initiated on local node
[2026-06-08T22:19:29.700362Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.700463Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.700508Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.701642Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.701977Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.702227Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.707326Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0005] Task initiated on local node
[2026-06-08T22:19:29.709164Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0002] Task initiated on local node
[2026-06-08T22:19:29.710465Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0004] Task initiated on local node
[2026-06-08T22:19:29.718477Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.719615Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.723120Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0006] Task initiated on local node
[2026-06-08T22:19:29.760464Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0003] Task initiated on local node
[2026-06-08T22:19:29.784140Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.784222Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.784270Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.785399Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.785719Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.786112Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.791108Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0002] Task initiated on local node
[2026-06-08T22:19:29.791446Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0005] Task initiated on local node
[2026-06-08T22:19:29.794131Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0000] Task initiated on local node
[2026-06-08T22:19:29.795239Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.796991Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.800145Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0006] Task initiated on local node
[2026-06-08T22:19:29.829187Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.831083Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.834424Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0004] Task initiated on local node
[2026-06-08T22:19:29.835076Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.836813Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.839843Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0001] Task initiated on local node
[2026-06-08T22:19:29.901263Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.902468Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.905722Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0001] Task initiated on local node
[2026-06-08T22:19:30.368051Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.369847Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.373165Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0003] Task initiated on local node
[2026-06-08T22:19:30.434358Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.436197Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.439138Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0004] Task initiated on local node
[2026-06-08T22:19:30.500618Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.502451Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.505833Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0007] Task initiated on local node
[2026-06-08T22:19:30.566905Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.568699Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.572082Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0007] Task initiated on local node
[2026-06-08T22:19:30.633239Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.635057Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.638144Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0006] Task initiated on local node
[2026-06-08T22:19:30.950210Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.951323Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.954351Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0006] Task initiated on local node
[2026-06-08T22:19:31.316346Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.317986Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.321419Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0001] Task initiated on local node
[2026-06-08T22:19:31.382475Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.384406Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.387557Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0003] Task initiated on local node
[2026-06-08T22:19:31.400759Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.402331Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.405368Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0002] Task initiated on local node
[2026-06-08T22:19:31.466397Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.466497Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.467515Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.467832Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.471788Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0003] Task initiated on local node
[2026-06-08T22:19:31.472818Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0006] Task initiated on local node
[2026-06-08T22:19:31.532563Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.533690Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.537014Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0007] Task initiated on local node
[2026-06-08T22:19:31.566120Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.567210Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.570282Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0004] Task initiated on local node
[2026-06-08T22:19:31.631442Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.632581Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.635946Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0002] Task initiated on local node
[2026-06-08T22:19:31.797324Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.798501Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.801557Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0004] Task initiated on local node
[2026-06-08T22:19:31.863280Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.864314Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.868148Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0004] Task initiated on local node
[2026-06-08T22:19:32.079326Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.080444Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.083371Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0001] Task initiated on local node
[2026-06-08T22:19:32.144608Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.145741Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.148615Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0008] Task initiated on local node
[2026-06-08T22:19:32.260078Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.261140Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.264047Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0008] Task initiated on local node
[2026-06-08T22:19:32.325253Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.326555Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.330188Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0001] Task initiated on local node
[2026-06-08T22:19:32.441275Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.442317Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.445554Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0001] Task initiated on local node
[2026-06-08T22:19:32.506568Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.507520Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.510325Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0011] Task initiated on local node
[2026-06-08T22:19:32.571482Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.572461Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.575913Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0006] Task initiated on local node
[2026-06-08T22:19:32.636730Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.637761Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.640668Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0002] Task initiated on local node
[2026-06-08T22:19:32.752031Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.753001Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.756010Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0007] Task initiated on local node
[2026-06-08T22:19:32.867257Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.868244Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.871725Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0007] Task initiated on local node
[2026-06-08T22:19:32.932603Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.933977Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.937218Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0006] Task initiated on local node
[2026-06-08T22:19:32.998321Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.999317Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.002642Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0001] Task initiated on local node
[2026-06-08T22:19:33.214109Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.215076Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.217959Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0002] Task initiated on local node
[2026-06-08T22:19:33.247381Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.248772Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.251531Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0001] Task initiated on local node
[2026-06-08T22:19:33.312813Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.314227Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.318133Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0000] Task initiated on local node
[2026-06-08T22:19:33.322781Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.324026Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.327192Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0005] Task initiated on local node
[2026-06-08T22:19:33.388268Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.388384Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.389677Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.389999Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.392939Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0000] Task initiated on local node
[2026-06-08T22:19:33.394620Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0005] Task initiated on local node
[2026-06-08T22:19:33.454432Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.454541Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.455759Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.456137Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.458976Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0000] Task initiated on local node
[2026-06-08T22:19:33.459667Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0002] Task initiated on local node
[2026-06-08T22:19:33.520380Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.520479Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.521709Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.522198Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.526624Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0010] Task initiated on local node
[2026-06-08T22:19:33.528040Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0005] Task initiated on local node
[2026-06-08T22:19:33.686923Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.687780Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.690456Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0002] Task initiated on local node
[2026-06-08T22:19:33.751743Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.752594Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.755796Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0001] Task initiated on local node
[2026-06-08T22:19:33.816949Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.817806Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.821139Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_011_chr12_0000] Task initiated on local node
[2026-06-08T22:19:33.881937Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.882814Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.885777Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0000] Task initiated on local node
[2026-06-08T22:19:33.946793Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.947641Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.950975Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0005] Task initiated on local node
[2026-06-08T22:19:34.062155Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.063003Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.066094Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0003] Task initiated on local node
[2026-06-08T22:19:34.277610Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.278919Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.282200Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0003] Task initiated on local node
[2026-06-08T22:19:34.311395Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.312223Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.315810Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0008] Task initiated on local node
[2026-06-08T22:19:34.376522Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.377340Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.380352Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0006] Task initiated on local node
[2026-06-08T22:19:34.441309Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.442104Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.444980Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0002] Task initiated on local node
[2026-06-08T22:19:34.445904Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.446583Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.449673Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0005] Task initiated on local node
[2026-06-08T22:19:34.510896Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.512016Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.512300Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.513300Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.516778Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0008] Task initiated on local node
[2026-06-08T22:19:34.517632Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0008] Task initiated on local node
[2026-06-08T22:19:34.627605Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.628416Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.631218Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0004] Task initiated on local node
[2026-06-08T22:19:34.692536Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.693643Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.696884Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0005] Task initiated on local node
[2026-06-08T22:19:34.807900Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.808671Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.812223Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0005] Task initiated on local node
[2026-06-08T22:19:34.873050Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.874143Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.877671Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0007] Task initiated on local node
[2026-06-08T22:19:34.938586Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.939327Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.942167Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0009] Task initiated on local node
[2026-06-08T22:19:35.003617Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:35.004344Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:19:35.008040Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0006] Task initiated on local node
[2026-06-08T22:19:35.068938Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:35.069882Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:19:35.073273Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0003] Task initiated on local node
[2026-06-08T22:19:35.134070Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:35.398553Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:35.399205Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:19:35.402017Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0003] Task initiated on local node
[2026-06-08T22:19:35.463253Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:35.978504Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:35.979450Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:19:35.982649Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0008] Task initiated on local node
[2026-06-08T22:19:36.043817Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:36.308760Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:36.309690Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:19:36.312912Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0003] Task initiated on local node
[2026-06-08T22:19:36.374083Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:36.488758Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:36.489706Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-08T22:19:36.492387Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0010] Task initiated on local node
[2026-06-08T22:19:36.553847Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:36.618413Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:36.619008Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:19:36.622143Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0008] Task initiated on local node
[2026-06-08T22:19:36.635028Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:36.635742Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:19:36.638507Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0005] Task initiated on local node
[2026-06-08T22:19:36.667813Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:36.669422Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:37.184211Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:37.184838Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:19:37.187889Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0008] Task initiated on local node
[2026-06-08T22:19:37.249310Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:37.249704Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:37.249909Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-08T22:19:37.250169Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-08T22:19:37.250641Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-08T22:19:37.256056Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-08T22:19:37.257558Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-08T22:19:37.286801Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-08T22:19:37.314935Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:37.315011Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:37.315043Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:37.315336Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-08T22:19:37.315567Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-08T22:19:37.318675Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-08T22:19:37.319371Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-08T22:19:37.380118Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:37.380215Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:37.380484Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-08T22:19:37.383925Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-08T22:19:37.445100Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:45.813886Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-08T22:19:59.925753Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-08T22:19:59.925753Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] 
[2026-06-08T22:19:59.925753Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-08T22:19:59.925847Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] 
[2026-06-08T22:19:59.925858Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-08T22:19:59.925868Z] [nf-d4d6619eb3626fc89f9d868e5113ea16-26e6e-2z7gw] [727_1] [WorkflowRunner] Elapsed time for full workflow: 33 sec