cmdline: /opt/conda/share/sentieon-202308.03-3/libexec/driver -t 31 -r Homo_sapiens_assembly38.fasta -i HCC1395_tumor.md.bam --algo HsMetricAlgo --targets_list targets/xgen-exome-hyb-panel-v2-targets-hg38_minus_altera_v3_targets_postQC_hg38.bed --baits_list baits/xgen-exome-hyb-panel-v2_AND_altera_v3_probes_short_hg38_AND_cdx_spike_custom30off4x_hg38_AND_foresight_clarity.bed HCC1395_tumor_xgen-exome-hyb-panel-v2-targets-hg38_minus_altera_v3_targets_postQC_hg38.sentieon.hs_metrics
This software is licensed to bgold@natera.com by Sentieon Inc.
progress 5% @chr1:162000001, elapsed 0.0s, est remaining 0.4s, peak mem 115MB, user 0.1s, sys 0.2s, output queue size 2
progress 10% @chr2:71000001, elapsed 0.0s, est remaining 0.3s, peak mem 115MB, user 0.3s, sys 0.6s, output queue size 2
progress 15% @chr2:233000001, elapsed 0.1s, est remaining 0.3s, peak mem 115MB, user 0.7s, sys 0.8s, output queue size 2
progress 20% @chr3:149000001, elapsed 0.1s, est remaining 0.3s, peak mem 115MB, user 0.9s, sys 1.0s, output queue size 4
progress 25% @chr4:113000001, elapsed 0.1s, est remaining 0.3s, peak mem 115MB, user 1.0s, sys 1.3s, output queue size 2
progress 30% @chr5:85000001, elapsed 0.1s, est remaining 0.3s, peak mem 115MB, user 1.5s, sys 1.5s, output queue size 1
progress 35% @chr6:64000001, elapsed 0.1s, est remaining 0.2s, peak mem 115MB, user 1.8s, sys 1.8s, output queue size 1
progress 40% @chr7:55000001, elapsed 0.1s, est remaining 0.2s, peak mem 115MB, user 1.9s, sys 2.1s, output queue size 1
progress 45% @chr8:57000001, elapsed 0.2s, est remaining 0.2s, peak mem 115MB, user 2.0s, sys 2.4s, output queue size 8
progress 50% @chr9:73000001, elapsed 0.2s, est remaining 0.2s, peak mem 115MB, user 2.1s, sys 2.9s, output queue size 4
progress 55% @chr10:93000001, elapsed 0.2s, est remaining 0.2s, peak mem 115MB, user 2.3s, sys 3.4s, output queue size 2
progress 60% @chr11:122000001, elapsed 0.2s, est remaining 0.1s, peak mem 115MB, user 2.6s, sys 3.5s, output queue size 6
progress 65% @chr13:11000001, elapsed 0.2s, est remaining 0.1s, peak mem 115MB, user 2.9s, sys 3.7s, output queue size 4
progress 70% @chr14:60000001, elapsed 0.2s, est remaining 0.1s, peak mem 115MB, user 3.1s, sys 4.1s, output queue size 1
progress 75% @chr16:14000001, elapsed 0.3s, est remaining 0.1s, peak mem 115MB, user 3.5s, sys 4.3s, output queue size 4
progress 80% @chr17:81000001, elapsed 0.3s, est remaining 0.1s, peak mem 115MB, user 3.6s, sys 4.6s, output queue size 3
progress 85% @chr20:20000001, elapsed 0.3s, est remaining 0.1s, peak mem 115MB, user 4.0s, sys 4.7s, output queue size 2
progress 90% @chrX:41000001, elapsed 0.3s, est remaining 0.0s, peak mem 155MB, user 4.2s, sys 5.0s, output queue size 114
progress 95% @chrY:37000001, elapsed 0.4s, est remaining 0.0s, peak mem 172MB, user 4.6s, sys 5.4s, output queue size 276
progress 100% @chr21:41000001, elapsed 0.7s, est remaining 0.0s, peak mem 196MB, user 6.2s, sys 5.9s, output queue size 3664
sw version: sentieon-genomics-202308.03
os version: Linux 6.12.88
cpu vendor: GenuineIntel
 signature: 000c06f2
  features: bfebfbff 7ffefbff
  extended: f3bfb7ef fb417ffe
  amd bits: 2c100800 00000121
     brand: INTEL(R) XEON(R) PLATINUM 8559C
threads: 31 max 96
algo: HsMetricAlgo
license: sentieon:Metrics=31
input file size: 50813903
reads: 1001320
contig: 3367 intervals 3217346917 bases
advance: 3219322 calls 1.274 user 2.955 sys 3.967 real
done: 1 calls 0.001 user 0.000 sys 0.006 real
exec_no_coor: 1 calls 0.000 user 0.000 sys 0.000 real
execute: 1 calls 0.006 user 0.002 sys 0.662 real
idle: 77 calls 0.023 user 0.017 sys 38.581 real
init: 1 calls 0.000 user 0.000 sys 0.000 real
overall: 206499840 mem 6.733 user 6.396 sys 2.113 real