File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/7b/49fea65a5dfb95bc14feb714cf374d/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-8ao4si46 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:24:53,378 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:24:54,161 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:24:54,326 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:24:55,195 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:24:55,341 - cnv_pipe.batch.run_model - INFO - Processing cluster 1302 with 157 probes
2026-06-08 22:24:55,717 - cnv_pipe.batch.run_model.cluster1302 - INFO - Child process started for cluster 1302 with 157 probes
2026-06-08 22:25:41,842 - cnv_pipe.batch.run_model.cluster1302 - INFO - Child process finished cluster 1302. Wrote cluster_1302_samples.csv and cluster_1302_params.csv
2026-06-08 22:25:41,843 - cnv_pipe.batch.run_model - INFO - Cluster 1302 finished in 46.50 seconds. Status: SUCCESS