File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/ef/6b9db1d60ca35551b07b7d47d68cbe/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-j61nxg5c because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:24:43,651 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:24:44,436 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:24:44,600 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:24:45,515 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:24:45,674 - cnv_pipe.batch.run_model - INFO - Processing cluster 1247 with 164 probes
2026-06-08 22:24:46,048 - cnv_pipe.batch.run_model.cluster1247 - INFO - Child process started for cluster 1247 with 164 probes
2026-06-08 22:25:34,208 - cnv_pipe.batch.run_model.cluster1247 - INFO - Child process finished cluster 1247. Wrote cluster_1247_samples.csv and cluster_1247_params.csv
2026-06-08 22:25:34,209 - cnv_pipe.batch.run_model - INFO - Cluster 1247 finished in 48.53 seconds. Status: SUCCESS