Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/97/8f0619b5f1c0a49469ff5d39e9d8d0/.command.sh
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr12_102480219-102480663.bed.gz
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Sequence/WholeGenomeFasta/Homo_sapiens_assembly38.fasta.fai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/53/ceed4bf612d62859d876f95d1d2d6f/HCC1395_BL.recalibrated.bam
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/53/ceed4bf612d62859d876f95d1d2d6f/HCC1395_BL.recalibrated.bam.bai
  Downloading: s3://natera-platform-sandbox/pipeline-resources/AIH/dna_daq/stored-normals/reference-NA12878-downsampled-500k.bam.bai
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/97/8f0619b5f1c0a49469ff5d39e9d8d0/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/intervals/altera_padded_intervals/scatter/chr12_102480219-102480663.bed.gz.tbi
==> STAGING COMPLETE (10 inputs)


Successfully created workflow run script.
To execute the workflow, run the following script and set appropriate options:

/var/tmp/strelka/runWorkflow.py
[2026-06-08T22:19:25.864253Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Initiating pyFlow run
[2026-06-08T22:19:25.865204Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] pyFlowClientWorkflowClass: StrelkaSomaticWorkflow
[2026-06-08T22:19:25.865229Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] pyFlowVersion: 1.1.20
[2026-06-08T22:19:25.865235Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] pythonVersion: 2.7.15.final.0
[2026-06-08T22:19:25.865242Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] WorkingDir: '/tmp/nxf.XXXXGSmkpw'
[2026-06-08T22:19:25.865247Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] ProcessCmdLine: '/var/tmp/strelka/runWorkflow.py -m local -j 8'
[2026-06-08T22:19:25.865255Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] [RunParameters] mode: local
[2026-06-08T22:19:25.865260Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] [RunParameters] nCores: 8
[2026-06-08T22:19:25.865266Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] [RunParameters] memMb: 1523801
[2026-06-08T22:19:25.865271Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] [RunParameters] dataDir: /var/tmp/strelka/workspace/pyflow.data
[2026-06-08T22:19:25.865277Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] [RunParameters] isDryRun: False
[2026-06-08T22:19:25.865281Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] [RunParameters] isContinue: False
[2026-06-08T22:19:25.865287Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] [RunParameters] isForceContinue: True
[2026-06-08T22:19:25.865292Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] [RunParameters] mailTo: ''
[2026-06-08T22:19:25.865864Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:masterWorkflow] Starting task specification for master workflow
[2026-06-08T22:19:25.866017Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [StrelkaSomaticWorkflow] Initiating Strelka somatic workflow version: 2.9.10
[2026-06-08T22:19:25.873650Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding sub-workflow task 'CallGenome' to master workflow
[2026-06-08T22:19:25.874523Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching sub-workflow task: 'CallGenome' from master workflow
[2026-06-08T22:19:25.874675Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:masterWorkflow] Finished task specification for master workflow
[2026-06-08T22:19:25.874919Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome] Starting task specification for sub-workflow
[2026-06-08T22:19:25.875323Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+makeTmpDir' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.876885Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.877131Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+makeTmpDir' from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.877349Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.878245Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.880792Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.881503Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+makeTmpDir] Task initiated on local node
[2026-06-08T22:19:25.881728Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.882140Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.882409Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.882651Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.882890Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.883038Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.883118Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.883261Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.883341Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.883481Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.883565Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.883702Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.883778Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.884371Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.884472Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.884626Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.884712Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.884853Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.884935Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.885084Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.885163Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.885302Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.885384Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.886027Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.886154Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.886332Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.886424Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.886601Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.886709Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.886893Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.887054Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.887348Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.887809Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.887959Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.888039Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.888181Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.888264Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.888401Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.888478Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.888624Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.888783Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.889290Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.889709Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.889871Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.889961Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.890100Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.890182Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.890321Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.890396Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.890538Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.890661Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.890861Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.891651Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.891891Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.891987Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.892144Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.892227Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.892410Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.892501Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.892791Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.893547Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.893763Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.893873Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.894030Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.894119Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.894259Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.894342Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.896651Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.897265Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.897429Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.897517Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.897660Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.897743Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.897912Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.898046Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.898204Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.898303Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.898635Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.899391Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.899554Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.899642Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.899778Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.899859Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.899998Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.900078Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.900211Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.900290Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.900442Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.900652Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.901598Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.901678Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.919940Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.920180Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.920273Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+completedAllGenomeSegments' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.920605Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.920693Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+SNV_index_vcf' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.920821Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_concat_vcf' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.920915Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+Indel_index_vcf' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.921203Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+makeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.921372Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+mergeRunStats' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.922545Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Adding command task 'CallGenome+removeTmpDir' to sub-workflow 'CallGenome'
[2026-06-08T22:19:25.922664Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome] Finished task specification for sub-workflow
[2026-06-08T22:19:25.922789Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.923211Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.923775Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.924445Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.925153Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.926480Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.927842Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.929127Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:19:25.935184Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0004] Task initiated on local node
[2026-06-08T22:19:25.937977Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0003] Task initiated on local node
[2026-06-08T22:19:25.942773Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0007] Task initiated on local node
[2026-06-08T22:19:25.945917Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0007] Task initiated on local node
[2026-06-08T22:19:25.948493Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0004] Task initiated on local node
[2026-06-08T22:19:25.950073Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0002] Task initiated on local node
[2026-06-08T22:19:25.956572Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0002] Task initiated on local node
[2026-06-08T22:19:25.957083Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0008] Task initiated on local node
[2026-06-08T22:19:26.070424Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.070517Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.070559Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.070588Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.071700Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.072024Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.072359Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.072909Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.080964Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0007] Task initiated on local node
[2026-06-08T22:19:26.082451Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0002] Task initiated on local node
[2026-06-08T22:19:26.082609Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0006] Task initiated on local node
[2026-06-08T22:19:26.160775Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0011] Task initiated on local node
[2026-06-08T22:19:26.187956Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.189249Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.193429Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0009] Task initiated on local node
[2026-06-08T22:19:26.304303Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.305760Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.309422Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0000] Task initiated on local node
[2026-06-08T22:19:26.420485Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.421874Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.424853Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0000] Task initiated on local node
[2026-06-08T22:19:26.486076Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.487344Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.490583Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0001] Task initiated on local node
[2026-06-08T22:19:26.601994Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.604003Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:19:26.608404Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0001] Task initiated on local node
[2026-06-08T22:19:27.020125Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.021298Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.024400Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0002] Task initiated on local node
[2026-06-08T22:19:27.085603Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.087069Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.090750Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0009] Task initiated on local node
[2026-06-08T22:19:27.853221Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.854480Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.857644Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0003] Task initiated on local node
[2026-06-08T22:19:27.969061Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.970339Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:19:27.973341Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0003] Task initiated on local node
[2026-06-08T22:19:28.034730Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.036634Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.039997Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0004] Task initiated on local node
[2026-06-08T22:19:28.401762Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.403023Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.407250Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0004] Task initiated on local node
[2026-06-08T22:19:28.617947Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.619658Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.623243Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0005] Task initiated on local node
[2026-06-08T22:19:28.652229Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.653941Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.657563Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0006] Task initiated on local node
[2026-06-08T22:19:28.718235Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.719358Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.722508Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0010] Task initiated on local node
[2026-06-08T22:19:28.727418Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.729079Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.732399Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0006] Task initiated on local node
[2026-06-08T22:19:28.793568Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.795417Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:19:28.799358Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0007] Task initiated on local node
[2026-06-08T22:19:29.060667Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.062556Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.065932Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0000] Task initiated on local node
[2026-06-08T22:19:29.177317Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.179196Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.182577Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0002] Task initiated on local node
[2026-06-08T22:19:29.243601Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.245288Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.248303Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0004] Task initiated on local node
[2026-06-08T22:19:29.309671Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.311869Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.315702Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0002] Task initiated on local node
[2026-06-08T22:19:29.376438Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.376548Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.378587Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.379098Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.382748Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0004] Task initiated on local node
[2026-06-08T22:19:29.439855Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0003] Task initiated on local node
[2026-06-08T22:19:29.443659Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.443788Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.445404Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.445820Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.450379Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0007] Task initiated on local node
[2026-06-08T22:19:29.482909Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0005] Task initiated on local node
[2026-06-08T22:19:29.511119Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.512654Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.516429Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0000] Task initiated on local node
[2026-06-08T22:19:29.627363Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.629275Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.632460Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0000] Task initiated on local node
[2026-06-08T22:19:29.693738Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.695347Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.699342Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0007] Task initiated on local node
[2026-06-08T22:19:29.760257Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.761788Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.764983Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0008] Task initiated on local node
[2026-06-08T22:19:29.826391Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.827904Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.831441Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0009] Task initiated on local node
[2026-06-08T22:19:29.892303Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.892430Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.893908Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.894274Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.900089Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+fixVcfHeader_chromId_011_chr12_0000] Task initiated on local node
[2026-06-08T22:19:29.900533Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0001] Task initiated on local node
[2026-06-08T22:19:29.959768Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+fixVcfHeader_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.961332Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.965177Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0001] Task initiated on local node
[2026-06-08T22:19:29.965607Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.967127Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:19:29.970334Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0005] Task initiated on local node
[2026-06-08T22:19:30.031448Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.033005Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.036447Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0006] Task initiated on local node
[2026-06-08T22:19:30.097771Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.099329Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.102201Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0006] Task initiated on local node
[2026-06-08T22:19:30.163590Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.164642Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.167902Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0006] Task initiated on local node
[2026-06-08T22:19:30.780231Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.781562Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.785082Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0004] Task initiated on local node
[2026-06-08T22:19:30.845851Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.847065Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:19:30.850324Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0002] Task initiated on local node
[2026-06-08T22:19:31.011753Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.012737Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.015975Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0006] Task initiated on local node
[2026-06-08T22:19:31.277523Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.278512Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.281624Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0001] Task initiated on local node
[2026-06-08T22:19:31.342739Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.343726Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.347251Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0011] Task initiated on local node
[2026-06-08T22:19:31.408028Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0011' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.408995Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.411818Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0001] Task initiated on local node
[2026-06-08T22:19:31.473042Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.473984Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.477257Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0004] Task initiated on local node
[2026-06-08T22:19:31.538439Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.539450Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.543097Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0002] Task initiated on local node
[2026-06-08T22:19:31.603831Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.604698Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.607802Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0001] Task initiated on local node
[2026-06-08T22:19:31.608567Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.609288Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.612564Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0000] Task initiated on local node
[2026-06-08T22:19:31.673542Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.673634Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.674572Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.674892Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.679484Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0000] Task initiated on local node
[2026-06-08T22:19:31.680279Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0000] Task initiated on local node
[2026-06-08T22:19:31.789431Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.790437Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.793760Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0008] Task initiated on local node
[2026-06-08T22:19:31.905102Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.906170Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.909769Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0001] Task initiated on local node
[2026-06-08T22:19:31.971435Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.972423Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:19:31.975511Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0004] Task initiated on local node
[2026-06-08T22:19:32.036609Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.037622Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.040893Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0007] Task initiated on local node
[2026-06-08T22:19:32.152275Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.152398Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.153697Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.154178Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.158000Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0005] Task initiated on local node
[2026-06-08T22:19:32.188221Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0002] Task initiated on local node
[2026-06-08T22:19:32.218802Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.218909Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.220220Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.220579Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.224557Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0007] Task initiated on local node
[2026-06-08T22:19:32.226036Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0003] Task initiated on local node
[2026-06-08T22:19:32.285255Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.286255Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.290100Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_011_chr12_0005] Task initiated on local node
[2026-06-08T22:19:32.290686Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.291883Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.295521Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_015_chr16_0005] Task initiated on local node
[2026-06-08T22:19:32.356361Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.357280Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.360459Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0005] Task initiated on local node
[2026-06-08T22:19:32.373357Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.374239Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.378751Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_014_chr15_0008] Task initiated on local node
[2026-06-08T22:19:32.438690Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.439563Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.442773Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0000] Task initiated on local node
[2026-06-08T22:19:32.503540Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.504426Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.507750Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0003] Task initiated on local node
[2026-06-08T22:19:32.819472Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.820693Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.823978Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_012_chr13_0003] Task initiated on local node
[2026-06-08T22:19:32.935358Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.936691Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:19:32.940235Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0008] Task initiated on local node
[2026-06-08T22:19:33.702508Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.703383Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.706978Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0003] Task initiated on local node
[2026-06-08T22:19:33.767955Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.768823Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.771509Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0002] Task initiated on local node
[2026-06-08T22:19:33.832760Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0002' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.833580Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.837182Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0007] Task initiated on local node
[2026-06-08T22:19:33.897885Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.898727Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.902096Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0009] Task initiated on local node
[2026-06-08T22:19:33.963022Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0009' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.963807Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:19:33.967261Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+callGenomeSegment_chromId_013_chr14_0005] Task initiated on local node
[2026-06-08T22:19:34.028105Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.028882Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.031685Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0006] Task initiated on local node
[2026-06-08T22:19:34.092941Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.093070Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.094132Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.094465Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.098143Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0008] Task initiated on local node
[2026-06-08T22:19:34.098800Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0005] Task initiated on local node
[2026-06-08T22:19:34.159910Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.160013Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.160731Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.161159Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.165142Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0001] Task initiated on local node
[2026-06-08T22:19:34.166454Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0008] Task initiated on local node
[2026-06-08T22:19:34.195886Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.196975Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.197253Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.198206Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.201203Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0010] Task initiated on local node
[2026-06-08T22:19:34.202550Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_011_chr12_0003] Task initiated on local node
[2026-06-08T22:19:34.263566Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.263677Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_011_chr12_0010' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.264321Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.264717Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.267676Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0006] Task initiated on local node
[2026-06-08T22:19:34.268887Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0001] Task initiated on local node
[2026-06-08T22:19:34.328884Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.328984Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0001' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.329872Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.333001Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0007] Task initiated on local node
[2026-06-08T22:19:34.394205Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0007' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.458403Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.459053Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.461771Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0006] Task initiated on local node
[2026-06-08T22:19:34.523031Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0006' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.687369Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.687982Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' from sub-workflow 'CallGenome'
[2026-06-08T22:19:34.691199Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_014_chr15_0004] Task initiated on local node
[2026-06-08T22:19:34.752780Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_014_chr15_0004' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:35.067621Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:35.068225Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' from sub-workflow 'CallGenome'
[2026-06-08T22:19:35.071336Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_015_chr16_0000] Task initiated on local node
[2026-06-08T22:19:35.132522Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_015_chr16_0000' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:35.296772Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:35.297399Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' from sub-workflow 'CallGenome'
[2026-06-08T22:19:35.300246Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_012_chr13_0003] Task initiated on local node
[2026-06-08T22:19:35.361596Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_012_chr13_0003' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:35.776455Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:35.777076Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' from sub-workflow 'CallGenome'
[2026-06-08T22:19:35.779914Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0008] Task initiated on local node
[2026-06-08T22:19:35.841207Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0008' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:37.057555Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+callGenomeSegment_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:37.058190Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' from sub-workflow 'CallGenome'
[2026-06-08T22:19:37.061012Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+compressSegmentOutput_chromId_013_chr14_0005] Task initiated on local node
[2026-06-08T22:19:37.122058Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+compressSegmentOutput_chromId_013_chr14_0005' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:37.122428Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+completedAllGenomeSegments' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:37.122587Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+SNV_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-08T22:19:37.122884Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+Indel_concat_vcf' from sub-workflow 'CallGenome'
[2026-06-08T22:19:37.123375Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+mergeRunStats' from sub-workflow 'CallGenome'
[2026-06-08T22:19:37.128786Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+SNV_concat_vcf] Task initiated on local node
[2026-06-08T22:19:37.130131Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+Indel_concat_vcf] Task initiated on local node
[2026-06-08T22:19:37.131706Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+mergeRunStats] Task initiated on local node
[2026-06-08T22:19:37.187640Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+Indel_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:37.187717Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+mergeRunStats' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:37.187747Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+SNV_concat_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:37.188015Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+Indel_index_vcf' from sub-workflow 'CallGenome'
[2026-06-08T22:19:37.188236Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+SNV_index_vcf' from sub-workflow 'CallGenome'
[2026-06-08T22:19:37.191549Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+Indel_index_vcf] Task initiated on local node
[2026-06-08T22:19:37.192479Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+SNV_index_vcf] Task initiated on local node
[2026-06-08T22:19:37.220591Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+SNV_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:37.220787Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+Indel_index_vcf' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:37.221154Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Launching command task: 'CallGenome+removeTmpDir' from sub-workflow 'CallGenome'
[2026-06-08T22:19:37.224364Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskRunner:CallGenome+removeTmpDir] Task initiated on local node
[2026-06-08T22:19:37.253727Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed command task: 'CallGenome+removeTmpDir' launched from sub-workflow 'CallGenome'
[2026-06-08T22:19:44.871421Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [TaskManager] Completed sub-workflow task: 'CallGenome' launched from master workflow
[2026-06-08T22:19:58.984362Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Strelka somatic workflow successfully completed.
[2026-06-08T22:19:58.984362Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] 
[2026-06-08T22:19:58.984362Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] 	workflow version: 2.9.10
[2026-06-08T22:19:58.984454Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] 
[2026-06-08T22:19:58.984462Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Workflow successfully completed all tasks
[2026-06-08T22:19:58.984471Z] [nf-978f0619b5f1c0a49469ff5d39e9d8d0-20624-7tjxk] [721_1] [WorkflowRunner] Elapsed time for full workflow: 33 sec