File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/5f/7680f365cfb8e59ec662bbbe57e24a/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-zrw5tqti because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:25:10,844 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:25:11,641 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:25:11,806 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:25:12,689 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:25:12,840 - cnv_pipe.batch.run_model - INFO - Processing cluster 1403 with 181 probes
2026-06-08 22:25:13,221 - cnv_pipe.batch.run_model.cluster1403 - INFO - Child process started for cluster 1403 with 181 probes
2026-06-08 22:26:06,784 - cnv_pipe.batch.run_model.cluster1403 - INFO - Child process finished cluster 1403. Wrote cluster_1403_samples.csv and cluster_1403_params.csv
2026-06-08 22:26:06,785 - cnv_pipe.batch.run_model - INFO - Cluster 1403 finished in 53.95 seconds. Status: SUCCESS