Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/af/5d95ca94cc2e248d7a2363128bbd5f/.command.sh
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/af/5d95ca94cc2e248d7a2363128bbd5f/.command.run
  Downloading: s3://natera-platform-sandbox/pipeline-resources/ngi-igenomes/igenomes/Homo_sapiens/GATK/GRCh38/Annotation/hotspots/hotspot_definitions.tsv
  Downloading: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4d/328baeab5c50c96208fe4be44032c0/positive_somatic_control_1.snv_indel.phased.vep.vcf.gz
==> STAGING COMPLETE (4 inputs)

Loaded 73 hotspot definitions
Processed 173 variants, labeled 0 as HOTSPOT