File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/09/5471f0a9949cc63d1c678fd3018a72/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-y7rn68x2 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:24:24,688 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:24:25,506 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:24:25,680 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:24:26,660 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:24:26,876 - cnv_pipe.batch.run_model - INFO - Processing cluster 1115 with 114 probes
2026-06-08 22:24:27,267 - cnv_pipe.batch.run_model.cluster1115 - INFO - Child process started for cluster 1115 with 114 probes
2026-06-08 22:25:03,908 - cnv_pipe.batch.run_model.cluster1115 - INFO - Child process finished cluster 1115. Wrote cluster_1115_samples.csv and cluster_1115_params.csv
2026-06-08 22:25:03,909 - cnv_pipe.batch.run_model - INFO - Cluster 1115 finished in 37.03 seconds. Status: SUCCESS