File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/4a/90cb152a827686b4c9c5a46b6a55cc/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-u0l71pz1 because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:25:25,846 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:25:26,686 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:25:26,854 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:25:27,899 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:25:27,968 - cnv_pipe.batch.run_model - INFO - Processing cluster 1493 with 175 probes
2026-06-08 22:25:28,352 - cnv_pipe.batch.run_model.cluster1493 - INFO - Child process started for cluster 1493 with 175 probes
2026-06-08 22:26:19,011 - cnv_pipe.batch.run_model.cluster1493 - INFO - Child process finished cluster 1493. Wrote cluster_1493_samples.csv and cluster_1493_params.csv
2026-06-08 22:26:19,013 - cnv_pipe.batch.run_model - INFO - Cluster 1493 finished in 51.04 seconds. Status: SUCCESS