File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/25/140f898311255a00290ecdc677282b/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-p_ue26jg because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:25:50,562 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:25:51,366 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:25:51,535 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:25:52,426 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:25:52,588 - cnv_pipe.batch.run_model - INFO - Processing cluster 1646 with 96 probes
2026-06-08 22:25:52,958 - cnv_pipe.batch.run_model.cluster1646 - INFO - Child process started for cluster 1646 with 96 probes
2026-06-08 22:26:23,281 - cnv_pipe.batch.run_model.cluster1646 - INFO - Child process finished cluster 1646. Wrote cluster_1646_samples.csv and cluster_1646_params.csv
2026-06-08 22:26:23,281 - cnv_pipe.batch.run_model - INFO - Cluster 1646 finished in 30.69 seconds. Status: SUCCESS