File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/c8/9fb1b07fd68846fbae72fb253d2da3/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-2k_oh49n because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:23:51,113 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:23:51,978 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:23:52,151 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:23:53,210 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:23:53,384 - cnv_pipe.batch.run_model - INFO - Processing cluster 794 with 156 probes
2026-06-08 22:23:53,791 - cnv_pipe.batch.run_model.cluster794 - INFO - Child process started for cluster 794 with 156 probes
2026-06-08 22:24:44,010 - cnv_pipe.batch.run_model.cluster794 - INFO - Child process finished cluster 794. Wrote cluster_794_samples.csv and cluster_794_params.csv
2026-06-08 22:24:44,010 - cnv_pipe.batch.run_model - INFO - Cluster 794 finished in 50.63 seconds. Status: SUCCESS