File Info

Filename
.command.err
Full Path
s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/49/7eb24ecfdba1c5733e8e125dfc8d25/.command.err
Size
1.3 KB
Attempt
mkdir -p failed for path /.config/matplotlib: [Errno 13] Permission denied: '/.config'
Matplotlib created a temporary cache directory at /tmp/matplotlib-ewpw2hwh because there was an issue with the default path (/.config/matplotlib); it is highly recommended to set the MPLCONFIGDIR environment variable to a writable directory, in particular to speed up the import of Matplotlib and to better support multiprocessing.
2026-06-08 22:23:46,506 - cnv_pipe.batch.jax_config - INFO - Setting JAX backend to 'cpu'
2026-06-08 22:23:47,340 - cnv_pipe.batch.run_model - INFO - JAX devices = [CpuDevice(id=0)]
2026-06-08 22:23:47,512 - cnv_pipe.batch.run_model - INFO - Loading counts from counts_1.parquet
2026-06-08 22:23:48,517 - cnv_pipe.batch.run_model - INFO - Loaded data with 4 samples
2026-06-08 22:23:48,706 - cnv_pipe.batch.run_model - INFO - Processing cluster 828 with 195 probes
2026-06-08 22:23:49,115 - cnv_pipe.batch.run_model.cluster828 - INFO - Child process started for cluster 828 with 195 probes
2026-06-08 22:24:46,799 - cnv_pipe.batch.run_model.cluster828 - INFO - Child process finished cluster 828. Wrote cluster_828_samples.csv and cluster_828_params.csv
2026-06-08 22:24:46,800 - cnv_pipe.batch.run_model - INFO - Cluster 828 finished in 58.09 seconds. Status: SUCCESS