succeeded COPY_INPUT_TO_OUTDIR (copy_input) 4s 3s - - 3.3 MB 103% 78.1 KB 826 bytes 0 bytes 16.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:ARRIBA_FILTER_SAME_GENE (rna_s1221_S42) 9s 7s - - 0 bytes 135% 60.5 KB 1.3 KB 0 bytes 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:ARRIBA (rna_s1221_S42) 50s 4s 38s 8s 4.1 GB 100% 4.3 GB 596.0 KB 0 bytes 592.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:SAMTOOLS_INDEX_FOR_ARRIBA (rna_s1221_S42) 9s 8s - - 3.1 MB 65% 5.8 MB 5.5 KB 0 bytes 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:SAMTOOLS_SORT_FOR_ARRIBA (rna_s1221_S42) 6s 3s - - 32.1 MB 329% 68.3 MB 11.6 MB 0 bytes 11.6 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:SAMTOOLS_VIEW_FOR_ARRIBA (rna_s1221_S42) 52s 4s 39s 9s 1.5 GB 223% 2.9 GB 5.7 MB 0 bytes 5.7 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:STAR_FOR_ARRIBA (rna_s1221_S42) 4m 10s 3s 2m 5s 2m 2s 32.0 GB 114% 30.0 GB 184.9 MB 2.7 GB 184.9 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:CANCER_INTRONS_TO_VCF (rna_s1221_S42) 5s 4s - - 12.6 MB 123% 1.0 MB 3.0 KB 0 bytes 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:CONTAMINATION_TO_MULTIQC (rna_s1221_S42) 3s 2s 0s 0s 12.9 MB 94% 1.1 MB 1.0 KB 0 bytes 8.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:CTATSPLICING_STARTOCANCERINTRONS (rna_s1221_S42) 1m 45s 26s 4s 1m 14s 478.1 MB 392% 71.3 MB 2.0 MB 58.0 MB 2.0 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQC (rna_s1221_S42) 9s 3s 4s 2s 723.8 MB 206% 24.4 MB 4.2 MB 0 bytes 4.5 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:AGAT_CONVERTSPGFF2TSV (rna_s1221_S42) 6s 4s 2s 0s 58.0 MB 100% 7.8 MB 156.6 KB 0 bytes 156.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:ARRIBA_VISUALISATION (rna_s1221_S42) 13s 3s 6s 4s 494.9 MB 279% 30.9 MB 16.3 KB 0 bytes 20.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:FUSIONINSPECTOR (rna_s1221_S42) 8m 12s 4s 7m 2s 1m 5s 35.8 GB 101% 29.4 GB 55.9 MB 578.6 MB 23.1 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:VCF_COLLECT (rna_s1221_S42) 7s 4s 1s 2s 184.1 MB 999% 31.8 MB 8.6 KB 0 bytes 24.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (rna_s1221_S42) 8s 4s 1s 2s 126.9 MB 864% 50.3 MB 3.8 MB 0 bytes 3.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:GTF2BED (ref_annot.gtf) 38s 5s 27s 6s 3.1 GB 100% 1.3 GB 27.7 MB 0 bytes 27.7 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_INDEX (Homo_sapiens.GRCh38.102.cdna.all.fa.gz) 5m 24s 4s 5m 13s 7s 2.7 GB 100% 1.7 GB 605.9 MB 0 bytes 606.0 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_QUANT (rna_s1221_S42) 26s 3s 16s 7s 1.3 GB 177% 357.6 MB 8.5 MB 0 bytes 8.6 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (rna_s1221_S42) 7s 5s 0s 1s 12.7 MB 1662% 4.6 MB 3.4 KB 0 bytes 8.0 KB 1
50 items found |
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