|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PRESEQ_LCEXTRAP (rna_s1221_S42)
|
18m 55s |
3s |
18m 34s |
18s |
1.5 GB |
100% |
7.1 GB |
471.0 KB |
4.0 KB |
468.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PRESEQ_TO_MULTIQC (rna_s1200_S21)
|
5s |
3s |
0s |
1s |
14.7 MB |
91% |
1.6 MB |
1.2 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PRESEQ_TO_MULTIQC (rna_s1221_S42)
|
4s |
2s |
0s |
1s |
14.8 MB |
93% |
1.5 MB |
1.2 KB |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_QC (rna_s1200_S21)
|
7m 58s |
2s |
6m 53s |
1m 2s |
9.2 GB |
609% |
96.1 GB |
809.6 MB |
16.2 GB |
110.7 MB |
2 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_QC (rna_s1221_S42)
|
8m 6s |
27s |
6m 40s |
58s |
9.2 GB |
638% |
99.2 GB |
806.5 MB |
13.5 GB |
109.7 MB |
2 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_TO_MULTIQC (rna_s1200_S21)
|
3s |
1s |
0s |
1s |
16.0 MB |
3826% |
4.1 MB |
5.7 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_TO_MULTIQC (rna_s1221_S42)
|
5s |
3s |
0s |
1s |
17.1 MB |
3798% |
4.1 MB |
5.7 KB |
0 bytes |
12.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (rna_s1200_S21)
|
45s |
20s |
4s |
20s |
236.8 MB |
100% |
188.2 MB |
31.5 MB |
7.1 MB |
31.5 MB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (rna_s1221_S42)
|
54s |
22s |
5s |
26s |
226.6 MB |
100% |
176.3 MB |
30.5 MB |
7.4 MB |
30.5 MB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:RNA_CONTAMINATION_DETECTION_WORKFLOW:EXTRACT_VAF_FEATURES (rna_s1200_S21)
|
5s |
4s |
0s |
0s |
13.0 MB |
4565% |
6.2 MB |
705 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:RNA_CONTAMINATION_DETECTION_WORKFLOW:EXTRACT_VAF_FEATURES (rna_s1221_S42)
|
5s |
3s |
0s |
1s |
13.6 MB |
4678% |
6.3 MB |
705 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:RNA_CONTAMINATION_DETECTION_WORKFLOW:NGSCheckMATE (rna_s1200_S21)
|
8m 41s |
13s |
8m 9s |
19s |
3.1 MB |
106% |
12.6 GB |
3.9 MB |
10.7 GB |
2.0 MB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:RNA_CONTAMINATION_DETECTION_WORKFLOW:NGSCheckMATE (rna_s1221_S42)
|
7m 24s |
12s |
6m 53s |
19s |
3.2 MB |
105% |
12.9 GB |
4.1 MB |
5.9 GB |
2.0 MB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:RNA_CONTAMINATION_DETECTION_WORKFLOW:PREDICT_CONTAMINATION (rna_s1200_S21)
|
4s |
2s |
0s |
1s |
15.5 MB |
102% |
929.0 KB |
882 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:RNA_CONTAMINATION_DETECTION_WORKFLOW:PREDICT_CONTAMINATION (rna_s1221_S42)
|
5s |
3s |
0s |
1s |
16.5 MB |
97% |
926.4 KB |
881 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:RUN_LEVEL_METRICS (run_level_qc)
|
6s |
4s |
0s |
1s |
0 bytes |
131% |
92.5 KB |
846 bytes |
0 bytes |
8.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:SAMTOOLS_INDEX_ALIGNMENT_CRAM (rna_s1200_S21)
|
10s |
2s |
1s |
7s |
7.4 MB |
99% |
2.4 GB |
346.0 KB |
0 bytes |
352.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:SAMTOOLS_INDEX_ALIGNMENT_CRAM (rna_s1221_S42)
|
13s |
2s |
1s |
10s |
7.2 MB |
100% |
2.5 GB |
367.0 KB |
0 bytes |
376.0 KB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:SAMTOOLS_VIEW_ALIGNMENT_CRAM (rna_s1200_S21)
|
2m 56s |
2s |
2m 17s |
37s |
789.0 MB |
310% |
15.6 GB |
2.4 GB |
15.6 GB |
2.4 GB |
1 |
|
succeeded
|
NFCORE_RNAFUSION:RNAFUSION:SAMTOOLS_VIEW_ALIGNMENT_CRAM (rna_s1221_S42)
|
3m 37s |
3s |
2m 55s |
39s |
783.0 MB |
307% |
15.9 GB |
2.5 GB |
15.9 GB |
2.5 GB |
1 |