| succeeded | COPY_INPUT_TO_OUTDIR (copy_input) | 6s | 5s | - | - | 3.3 MB | 106% | 79.2 KB | 821 bytes | 0 bytes | 16.0 KB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:ARRIBA_FILTER_SAME_GENE (rna_s1221_S42) | 7s | 5s | - | - | 0 bytes | 93% | 62.8 KB | 1.3 KB | 0 bytes | 12.0 KB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:ARRIBA_WORKFLOW:ARRIBA (rna_s1221_S42) | 1m 23s | 27s | 36s | 20s | 4.1 GB | 103% | 4.2 GB | 760.6 KB | 127.6 MB | 756.0 KB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:CANCER_INTRONS_TO_VCF (rna_s1221_S42) | 8s | 6s | - | - | 12.9 MB | 82% | 1.0 MB | 3.0 KB | 0 bytes | 12.0 KB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:CONTAMINATION_SKIPPED_LOW_READS (rna_s1221_S42) | 3s | 2s | 0s | 0s | 0 bytes | 56% | 75.3 KB | 946 bytes | 0 bytes | 12.0 KB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:CTATSPLICING_STARTOCANCERINTRONS (rna_s1221_S42) | 1m 37s | 16s | 5s | 1m 15s | 454.5 MB | 191% | 71.2 MB | 2.0 MB | 58.0 MB | 2.0 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:SAMTOOLS_INDEX_STAR_ALIGNMENT (rna_s1221_S42) | 5s | 3s | - | - | 9.2 MB | 137% | 14.0 MB | 1.6 MB | 0 bytes | 1.6 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:STAR_ALIGNMENT (rna_s1221_S42) | 5m 35s | 1s | 3m 49s | 1m 45s | 40.4 GB | 138% | 30.9 GB | 249.6 MB | 2.8 GB | 248.4 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:FASTQC (rna_s1221_S42) | 7s | 2s | 3s | 2s | 683.7 MB | 176% | 24.1 MB | 4.2 MB | 0 bytes | 4.5 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:AGAT_CONVERTSPGFF2TSV (rna_s1221_S42) | 15s | 12s | 1s | 2s | 59.5 MB | 102% | 7.7 MB | 156.6 KB | 0 bytes | 156.0 KB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:ARRIBA_VISUALISATION (rna_s1221_S42) | 13s | 2s | 5s | 6s | 480.2 MB | 113% | 30.9 MB | 16.3 KB | 0 bytes | 20.0 KB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:FUSIONINSPECTOR (rna_s1221_S42) | 8m 56s | 50s | 6m 32s | 1m 33s | 35.8 GB | 101% | 29.4 GB | 55.9 MB | 1.5 GB | 23.1 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:VCF_COLLECT (rna_s1221_S42) | 9s | 5s | 1s | 3s | 13.8 MB | 134% | 31.7 MB | 8.5 KB | 0 bytes | 24.0 KB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (rna_s1221_S42) | 14s | 10s | 1s | 2s | 26.9 MB | 975% | 50.2 MB | 3.8 MB | 0 bytes | 3.8 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:GTF2BED (ref_annot.gtf) | 28s | 3s | 15s | 10s | 3.2 GB | 100% | 1.3 GB | 27.7 MB | 4.0 KB | 27.7 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:KALLISTO_INDEX (Homo_sapiens.GRCh38.102.cdna.all.fa.gz) | 3m 43s | 3s | 3m 30s | 10s | 2.8 GB | 169% | 1.7 GB | 605.9 MB | 0 bytes | 607.3 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:KALLISTO_QUANT (rna_s1221_S42) | 23s | 2s | 11s | 10s | 1.3 GB | 219% | 359.4 MB | 10.3 MB | 244.5 MB | 10.4 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (rna_s1221_S42) | 5s | 3s | 0s | 1s | 19.1 MB | 4586% | 4.6 MB | 3.4 KB | 0 bytes | 8.0 KB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_TX2GENE_QC (rna_s1221_S42) | 4s | 1s | 2s | 1s | 223.9 MB | 1141% | 43.6 MB | 1.2 MB | 0 bytes | 1.2 MB | 1 |
| succeeded | NFCORE_RNAFUSION:RNAFUSION:MULTIQC | 41s | 29s | 6s | 5s | 131.9 MB | 140% | 71.1 MB | 22.6 MB | 0 bytes | 22.9 MB | 1 |