succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_READDUPLICATION (rna_s1200_S21) 1m 38s 10s 1m 24s 4s 3.4 GB 109% 878.9 MB 149.0 KB 0 bytes 164.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_READDUPLICATION (rna_s1221_S42) 1m 27s 2s 1m 21s 4s 3.4 GB 109% 947.1 MB 152.1 KB 0 bytes 168.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (rna_s1200_S21) 2m 52s 29s 2m 3s 20s 40.7 GB 161% 1.8 GB 981.1 MB 0 bytes 981.2 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (rna_s1221_S42) 2m 26s 2s 2m 7s 17s 43.2 GB 161% 1.9 GB 1.0 GB 0 bytes 1.0 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PICARD_COLLECTINSERTSIZEMETRICS (rna_s1200_S21) 51s 18s 28s 5s 405.9 MB 137% 886.6 MB 975.3 KB 0 bytes 984.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PICARD_COLLECTINSERTSIZEMETRICS (rna_s1221_S42) 49s 14s 30s 5s 392.5 MB 132% 954.0 MB 940.3 KB 0 bytes 948.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PICARD_COLLECTRNASEQMETRICS (rna_s1200_S21) 6m 17s 12s 6m 0s 5s 2.3 GB 102% 923.1 MB 713.4 KB 0 bytes 700.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PICARD_COLLECTRNASEQMETRICS (rna_s1221_S42) 5m 25s 1s 5m 19s 5s 2.5 GB 102% 991.4 MB 713.7 KB 0 bytes 700.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PRESEQ_LCEXTRAP (rna_s1200_S21) 2m 2s 2s 1m 56s 4s 206.9 MB 102% 853.7 MB 452.8 KB 0 bytes 460.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PRESEQ_LCEXTRAP (rna_s1221_S42) 2m 10s 1s 2m 5s 4s 175.6 MB 102% 922.0 MB 453.2 KB 0 bytes 460.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PRESEQ_TO_MULTIQC (rna_s1200_S21) 3s 2s 0s 0s 12.4 MB 103% 1.5 MB 1.1 KB 0 bytes 8.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PRESEQ_TO_MULTIQC (rna_s1221_S42) 5s 3s 0s 1s 12.4 MB 105% 1.5 MB 1.1 KB 0 bytes 8.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_QC (rna_s1200_S21) 2m 5s 23s 1m 24s 17s 5.5 GB 275% 10.1 GB 699.2 MB 468.3 MB 83.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_QC (rna_s1221_S42) 1m 44s 2s 1m 22s 19s 5.5 GB 282% 10.4 GB 698.2 MB 444.2 MB 83.0 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_TO_MULTIQC (rna_s1200_S21) 3s 1s 0s 1s 12.9 MB 1970% 4.1 MB 5.7 KB 0 bytes 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_TO_MULTIQC (rna_s1221_S42) 3s 1s 0s 1s 12.8 MB 1819% 4.1 MB 5.7 KB 0 bytes 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (rna_s1200_S21) 31s 24s 0s 6s 17.6 MB 101% 25.9 MB 2.8 MB 0 bytes 2.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (rna_s1221_S42) 25s 20s 0s 4s 17.0 MB 101% 24.9 MB 2.7 MB 0 bytes 2.7 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:RUN_LEVEL_INTERMEDIATE (run_level_qc) 6s 4s 0s 1s 13.2 MB 121% 1.2 MB 844 bytes 0 bytes 8.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:RUN_LEVEL_METRICS (run_level_qc) 32s 30s 0s 1s 0 bytes 114% 67.9 KB 814 bytes 0 bytes 8.0 KB 1
92 items found |
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