succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:SAMTOOLS_INDEX_STAR_ALIGNMENT (rna_s1200_S21) 11s 1s 6s 4s 23.8 MB 164% 853.8 MB 2.4 MB 0 bytes 2.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:SAMTOOLS_INDEX_STAR_ALIGNMENT (rna_s1221_S42) 12s 1s 6s 5s 23.4 MB 168% 922.0 MB 2.4 MB 0 bytes 2.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:STAR_ALIGNMENT (rna_s1200_S21) 4m 0s 2s 2m 59s 59s 35.5 GB 964% 45.3 GB 9.0 GB 6.6 GB 8.9 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:STAR_ALIGNMENT (rna_s1221_S42) 3m 53s 2s 2m 54s 57s 35.5 GB 988% 46.3 GB 10.1 GB 8.4 GB 9.8 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQC (rna_s1200_S21) 1m 11s 8s 57s 6s 555.8 MB 195% 1.4 GB 3.5 MB 0 bytes 3.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQC (rna_s1221_S42) 1m 8s 8s 56s 4s 484.1 MB 198% 1.4 GB 3.5 MB 0 bytes 3.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:AGAT_CONVERTSPGFF2TSV (rna_s1200_S21) 5s 1s 3s 1s 108.7 MB 100% 23.4 MB 3.6 MB 0 bytes 3.5 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:AGAT_CONVERTSPGFF2TSV (rna_s1221_S42) 6s 1s 3s 2s 107.4 MB 100% 25.2 MB 4.0 MB 0 bytes 3.9 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:ARRIBA_VISUALISATION (rna_s1200_S21) 2m 14s 1s 2m 9s 4s 2.3 GB 108% 1.5 GB 14.4 MB 0 bytes 14.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:ARRIBA_VISUALISATION (rna_s1221_S42) 2m 7s 1s 2m 1s 5s 2.3 GB 109% 1.5 GB 13.2 MB 0 bytes 13.2 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:FUSIONINSPECTOR (rna_s1200_S21) 11m 28s 2s 10m 13s 1m 12s 35.9 GB 211% 40.8 GB 3.9 GB 1.5 GB 115.7 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:FUSIONINSPECTOR (rna_s1221_S42) 11m 50s 2s 10m 37s 1m 10s 35.9 GB 203% 40.7 GB 3.8 GB 1.6 GB 114.7 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:VCF_COLLECT (rna_s1200_S21) 7s 4s 1s 2s 14.0 MB 1571% 34.4 MB 56.4 KB 0 bytes 60.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:VCF_COLLECT (rna_s1221_S42) 7s 4s 1s 2s 15.7 MB 1529% 34.7 MB 54.8 KB 0 bytes 60.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (rna_s1200_S21) 15s 9s 2s 3s 128.3 MB 505% 74.1 MB 28.4 MB 0 bytes 28.5 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (rna_s1221_S42) 15s 9s 2s 3s 126.4 MB 488% 75.7 MB 30.1 MB 0 bytes 30.1 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:GTF2BED (ref_annot.gtf) 28s 3s 17s 8s 3.1 GB 100% 1.3 GB 27.7 MB 4.0 KB 27.7 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_INDEX (Homo_sapiens.GRCh38.102.cdna.all.fa.gz) 2m 26s 2s 2m 19s 5s 2.7 GB 176% 1.7 GB 605.9 MB 0 bytes 605.9 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_QUANT (rna_s1200_S21) 1m 37s 2s 1m 29s 6s 1.4 GB 291% 1.6 GB 12.0 MB 1.6 GB 12.0 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_QUANT (rna_s1221_S42) 1m 39s 2s 1m 30s 7s 1.4 GB 303% 1.6 GB 11.9 MB 1.5 GB 12.0 MB 1
92 items found |
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