succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:SAMTOOLS_INDEX_STAR_ALIGNMENT (rna_s1200_S21) 12s 2s 6s 4s 23.9 MB 165% 853.7 MB 2.4 MB 0 bytes 2.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:SAMTOOLS_INDEX_STAR_ALIGNMENT (rna_s1221_S42) 12s 2s 6s 4s 23.5 MB 142% 922.0 MB 2.4 MB 0 bytes 2.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:STAR_ALIGNMENT (rna_s1200_S21) 4m 20s 2s 2m 57s 1m 21s 35.6 GB 972% 45.3 GB 9.0 GB 6.5 GB 8.9 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:STAR_ALIGNMENT (rna_s1221_S42) 4m 20s 2s 2m 56s 1m 22s 35.5 GB 984% 46.3 GB 10.1 GB 8.7 GB 9.8 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQC (rna_s1200_S21) 1m 9s 8s 56s 5s 564.4 MB 197% 1.4 GB 3.5 MB 0 bytes 3.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQC (rna_s1221_S42) 1m 15s 8s 1m 3s 4s 511.5 MB 200% 1.4 GB 3.5 MB 0 bytes 3.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:AGAT_CONVERTSPGFF2TSV (rna_s1200_S21) 5s 1s 3s 1s 108.7 MB 100% 23.4 MB 3.6 MB 0 bytes 3.5 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:AGAT_CONVERTSPGFF2TSV (rna_s1221_S42) 6s 1s 3s 2s 110.2 MB 100% 25.2 MB 4.0 MB 0 bytes 3.9 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:ARRIBA_VISUALISATION (rna_s1200_S21) 2m 32s 21s 2m 5s 6s 2.3 GB 108% 1.5 GB 14.4 MB 0 bytes 14.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:ARRIBA_VISUALISATION (rna_s1221_S42) 2m 29s 19s 2m 5s 5s 2.3 GB 109% 1.5 GB 13.2 MB 0 bytes 13.2 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:FUSIONINSPECTOR (rna_s1200_S21) 10m 44s 49s 8m 26s 1m 28s 35.9 GB 221% 40.8 GB 3.9 GB 1.6 GB 115.7 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:FUSIONINSPECTOR (rna_s1221_S42) 9m 59s 21s 8m 21s 1m 16s 35.9 GB 221% 40.7 GB 3.8 GB 1.6 GB 114.6 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:VCF_COLLECT (rna_s1200_S21) 7s 4s 1s 2s 15.7 MB 1612% 34.4 MB 56.4 KB 0 bytes 60.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:VCF_COLLECT (rna_s1221_S42) 4s 1s 1s 2s 15.6 MB 1610% 34.7 MB 54.8 KB 0 bytes 60.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (rna_s1200_S21) 14s 8s 2s 3s 128.1 MB 508% 74.1 MB 28.4 MB 0 bytes 28.5 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (rna_s1221_S42) 7s 1s 2s 3s 126.5 MB 489% 75.7 MB 30.1 MB 0 bytes 30.1 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:GTF2BED (ref_annot.gtf) 25s 2s 15s 8s 3.2 GB 100% 1.3 GB 27.7 MB 0 bytes 27.7 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_INDEX (Homo_sapiens.GRCh38.102.cdna.all.fa.gz) 2m 50s 3s 2m 41s 6s 2.8 GB 176% 1.7 GB 605.9 MB 0 bytes 605.9 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_QUANT (rna_s1200_S21) 1m 36s 2s 1m 27s 7s 1.4 GB 299% 1.6 GB 12.0 MB 1.6 GB 12.0 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_QUANT (rna_s1221_S42) 1m 38s 1s 1m 29s 8s 1.4 GB 297% 1.6 GB 12.0 MB 1.5 GB 12.0 MB 1
92 items found |
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