succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:SAMTOOLS_INDEX_STAR_ALIGNMENT (rna_s1200_S21) 13s 1s 6s 6s 24.0 MB 165% 853.7 MB 2.4 MB 0 bytes 2.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:SAMTOOLS_INDEX_STAR_ALIGNMENT (rna_s1221_S42) 12s 1s 6s 5s 23.1 MB 165% 922.0 MB 2.4 MB 0 bytes 2.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:STAR_ALIGNMENT (rna_s1200_S21) 4m 37s 2s 3m 9s 1m 26s 35.5 GB 987% 45.3 GB 9.0 GB 8.4 GB 8.9 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:STAR_ALIGNMENT (rna_s1221_S42) 4m 32s 2s 3m 4s 1m 26s 35.5 GB 990% 46.3 GB 10.1 GB 9.1 GB 9.8 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQC (rna_s1200_S21) 1m 0s 1s 55s 4s 528.0 MB 194% 1.4 GB 3.5 MB 0 bytes 3.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQC (rna_s1221_S42) 1m 1s 1s 56s 4s 528.9 MB 195% 1.4 GB 3.5 MB 0 bytes 3.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:AGAT_CONVERTSPGFF2TSV (rna_s1200_S21) 5s 1s 3s 1s 108.8 MB 100% 23.4 MB 3.6 MB 0 bytes 3.5 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:AGAT_CONVERTSPGFF2TSV (rna_s1221_S42) 5s 1s 3s 1s 108.7 MB 100% 25.2 MB 4.0 MB 0 bytes 3.9 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:ARRIBA_VISUALISATION (rna_s1200_S21) 2m 13s 1s 2m 5s 7s 2.3 GB 109% 1.5 GB 14.4 MB 0 bytes 14.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:ARRIBA_VISUALISATION (rna_s1221_S42) 2m 6s 1s 1m 59s 6s 2.2 GB 109% 1.5 GB 13.2 MB 0 bytes 13.2 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:FUSIONINSPECTOR (rna_s1200_S21) 11m 14s 1m 10s 8m 32s 1m 31s 35.9 GB 221% 40.8 GB 3.9 GB 1.6 GB 115.7 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:FUSIONINSPECTOR (rna_s1221_S42) 11m 10s 1m 8s 8m 40s 1m 21s 35.9 GB 219% 40.7 GB 3.8 GB 1.6 GB 114.6 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:VCF_COLLECT (rna_s1200_S21) 8s 4s 1s 3s 15.4 MB 1582% 34.4 MB 56.4 KB 0 bytes 60.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:VCF_COLLECT (rna_s1221_S42) 4s 1s 1s 2s 15.9 MB 1576% 34.7 MB 54.8 KB 0 bytes 60.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (rna_s1200_S21) 16s 10s 2s 3s 123.5 MB 491% 74.1 MB 28.4 MB 0 bytes 28.5 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (rna_s1221_S42) 17s 1s 2s 13s 126.4 MB 484% 75.7 MB 30.1 MB 0 bytes 30.1 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:GTF2BED (ref_annot.gtf) 25s 2s 16s 7s 3.2 GB 100% 1.3 GB 27.7 MB 4.8 MB 27.7 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_INDEX (Homo_sapiens.GRCh38.102.cdna.all.fa.gz) 2m 27s 2s 2m 19s 6s 2.8 GB 175% 1.7 GB 605.9 MB 0 bytes 605.9 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_QUANT (rna_s1200_S21) 1m 37s 1s 1m 27s 9s 1.4 GB 290% 1.6 GB 12.0 MB 1.5 GB 12.0 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_QUANT (rna_s1221_S42) 1m 41s 2s 1m 31s 8s 1.4 GB 296% 1.6 GB 11.8 MB 1.6 GB 11.8 MB 1
92 items found |
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