succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_INFEREXPERIMENT (rna_s1221_S42) 20s 13s 4s 3s 72.8 MB 267% 60.1 MB 831 bytes 0 bytes 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_INNERDISTANCE (rna_s1221_S42) 26s 12s 11s 3s 785.5 MB 200% 93.7 MB 5.7 MB 0 bytes 5.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_JUNCTIONANNOTATION (rna_s1221_S42) 22s 14s 5s 3s 168.1 MB 293% 68.8 MB 11.0 MB 0 bytes 11.0 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_JUNCTIONSATURATION (rna_s1221_S42) 20s 13s 5s 2s 102.3 MB 359% 66.0 MB 27.4 KB 0 bytes 40.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_READDISTRIBUTION (rna_s1221_S42) 1m 0s 13s 45s 2s 1.1 GB 119% 309.5 MB 1.7 KB 0 bytes 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_READDUPLICATION (rna_s1221_S42) 20s 14s 3s 3s 95.6 MB 323% 38.3 MB 13.8 KB 0 bytes 36.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (rna_s1221_S42) 1m 7s 22s 20s 25s 20.3 GB 179% 117.7 MB 19.5 MB 0 bytes 19.6 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PICARD_COLLECTINSERTSIZEMETRICS (rna_s1221_S42) 30s 24s 4s 2s 378.6 MB 523% 53.1 MB 928.0 KB 0 bytes 940.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PICARD_COLLECTRNASEQMETRICS (rna_s1221_S42) 38s 17s 16s 5s 1.3 GB 147% 83.5 MB 709.8 KB 0 bytes 700.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PRESEQ_LCEXTRAP (rna_s1221_S42) 7s 4s 1s 2s 9.6 MB 100% 14.0 MB 459.8 KB 0 bytes 468.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PRESEQ_TO_MULTIQC (rna_s1221_S42) 6s 4s 0s 1s 14.5 MB 101% 1.5 MB 1.1 KB 0 bytes 8.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_QC (rna_s1221_S42) 2m 55s 34s 1m 55s 25s 7.7 GB 270% 7.8 GB 716.3 MB 4.0 KB 85.3 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_TO_MULTIQC (rna_s1221_S42) 5s 3s 0s 1s 13.3 MB 1366% 4.1 MB 5.7 KB 0 bytes 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (rna_s1221_S42) 31s 29s 0s 1s 3.6 MB 131% 2.4 MB 19.7 KB 0 bytes 20.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:SAMTOOLS_INDEX_ALIGNMENT_CRAM (rna_s1221_S42) 6s 4s - - 3.2 MB 81% 3.1 MB 5.6 KB 0 bytes 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:SAMTOOLS_VIEW_ALIGNMENT_CRAM (rna_s1221_S42) 44s 3s 25s 16s 247.7 MB 122% 8.8 GB 3.0 MB 6.3 GB 3.0 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:STARFUSION_FILTER (rna_s1221_S42) 4m 33s 7s 4m 21s 4s 7.9 GB 104% 94.4 MB 76.0 KB 0 bytes 88.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:STARFUSION_WORKFLOW:STARFUSION (rna_s1221_S42) 2m 40s 34s 14s 1m 51s 2.9 GB 244% 241.6 MB 5.9 MB 72.8 MB 5.9 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:TRIM_WORKFLOW:FASTP (rna_s1221_S42) 10s 4s 3s 3s 746.1 MB 192% 36.5 MB 12.6 MB 0 bytes 12.6 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:TRIM_WORKFLOW:FASTQC_FOR_FASTP (rna_s1221_S42) 18s 12s 4s 2s 617.6 MB 250% 24.1 MB 4.1 MB 0 bytes 4.4 MB 1
40 items found |
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