.command.err - Workdir - NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (rna_s1200_S21)

File Info

Filename: .command.err
Full Path: s3://natera-rnd-pltf-dev-nextflow-scratch-01/work/2c/3a6a94d8a21dfb794e101570cf3980/.command.err
Size: 425 bytes
Task: NFCORE_RNAFUSION:RNAFUSION:KALLISTO_TO_MULTIQC (rna_s1200_S21)
Attempt

Content

Processing Kallisto file: rna_s1200_S21/abundance.h5
Successfully converted rna_s1200_S21/abundance.h5 to rna_s1200_S21_kallisto_mqc.tsv
  Sample: rna_s1200_S21
  Mean Fragment Length: 181.3 bp
  Median Fragment Length: 167.0 bp
  pct_mito_est_counts: 0.0%
  pct_ribo_est_counts: 4.58%
  pct_hk_est_counts: 2.97%
  pct_male_est_counts: 0.0%
  pct_mito_tpm: 0.0%
  pct_ribo_tpm: 10.9%
  pct_hk_tpm: 3.44%
  pct_male_tpm: 0.0%