succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:SAMTOOLS_INDEX_STAR_ALIGNMENT (rna_s1200_S21) 13s 2s 5s 6s 23.5 MB 166% 853.7 MB 2.4 MB 0 bytes 2.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:SAMTOOLS_INDEX_STAR_ALIGNMENT (rna_s1221_S42) 15s 2s 8s 5s 27.9 MB 155% 922.0 MB 2.4 MB 0 bytes 2.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:STAR_ALIGNMENT (rna_s1200_S21) 5m 28s 2s 4m 12s 1m 14s 35.5 GB 989% 45.3 GB 9.0 GB 3.3 GB 8.9 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:STAR_ALIGNMENT (rna_s1221_S42) 4m 19s 1s 3m 2s 1m 16s 35.5 GB 1000% 46.3 GB 10.1 GB 9.5 GB 9.8 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQC (rna_s1200_S21) 1m 9s 7s 57s 5s 491.9 MB 199% 1.4 GB 3.5 MB 0 bytes 3.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQC (rna_s1221_S42) 1m 9s 7s 59s 3s 495.6 MB 199% 1.4 GB 3.5 MB 0 bytes 3.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:AGAT_CONVERTSPGFF2TSV (rna_s1200_S21) 8s 3s 4s 1s 75.2 MB 101% 14.8 MB 1.7 MB 8.0 KB 1.7 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:AGAT_CONVERTSPGFF2TSV (rna_s1221_S42) 5s 2s 2s 1s 70.3 MB 100% 17.6 MB 2.3 MB 0 bytes 2.3 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:ARRIBA_VISUALISATION (rna_s1200_S21) 1m 40s 1s 1m 34s 5s 2.3 GB 114% 1.4 GB 6.0 MB 0 bytes 6.0 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:ARRIBA_VISUALISATION (rna_s1221_S42) 2m 4s 1s 1m 57s 6s 2.2 GB 111% 1.5 GB 9.4 MB 0 bytes 9.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:FUSIONINSPECTOR (rna_s1200_S21) 12m 0s 53s 8m 55s 2m 11s 35.8 GB 216% 40.4 GB 3.6 GB 1.5 GB 80.3 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:FUSIONINSPECTOR (rna_s1221_S42) 12m 1s 53s 8m 57s 2m 10s 35.9 GB 216% 40.4 GB 3.7 GB 1.5 GB 89.1 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:VCF_COLLECT (rna_s1200_S21) 4s 1s 1s 2s 13.7 MB 407% 33.0 MB 27.9 KB 0 bytes 36.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:VCF_COLLECT (rna_s1221_S42) 5s 2s 1s 2s 184.6 MB 404% 33.4 MB 40.3 KB 0 bytes 48.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (rna_s1200_S21) 6s 1s 2s 3s 125.2 MB 696% 59.8 MB 13.7 MB 0 bytes 13.7 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (rna_s1221_S42) 17s 12s 2s 2s 127.9 MB 609% 66.1 MB 20.2 MB 0 bytes 20.3 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:GTF2BED (ref_annot.gtf) 28s 3s 19s 6s 3.1 GB 100% 1.3 GB 27.7 MB 0 bytes 27.7 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_INDEX (Homo_sapiens.GRCh38.102.cdna.all.fa.gz) 2m 39s 3s 2m 28s 8s 2.7 GB 176% 1.7 GB 605.9 MB 0 bytes 606.0 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_QUANT (rna_s1200_S21) 2m 24s 2s 2m 14s 8s 1.4 GB 261% 1.6 GB 11.9 MB 1.6 GB 12.0 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_QUANT (rna_s1221_S42) 2m 18s 2s 2m 8s 8s 1.4 GB 273% 1.6 GB 12.0 MB 1.5 GB 12.0 MB 1
94 items found |
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