succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_READDISTRIBUTION (rna_s1221_S42) 1m 27s 6s 1m 16s 5s 1.1 GB 134% 1.2 GB 1.7 KB 0 bytes 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_READDUPLICATION (rna_s1200_S21) 1m 36s 10s 1m 22s 4s 3.5 GB 133% 878.9 MB 149.0 KB 0 bytes 164.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:BAM_RSEQC:RSEQC_READDUPLICATION (rna_s1221_S42) 2m 55s 19s 2m 32s 4s 3.3 GB 103% 947.1 MB 152.1 KB 0 bytes 168.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (rna_s1200_S21) 2m 44s 13s 2m 12s 19s 36.4 GB 162% 1.8 GB 981.1 MB 0 bytes 981.3 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:GATK4_MARKDUPLICATES (rna_s1221_S42) 2m 11s 11s 1m 42s 18s 34.5 GB 161% 1.9 GB 1.0 GB 0 bytes 1.0 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PICARD_COLLECTINSERTSIZEMETRICS (rna_s1200_S21) 47s 13s 28s 6s 589.8 MB 186% 886.6 MB 975.3 KB 0 bytes 984.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PICARD_COLLECTINSERTSIZEMETRICS (rna_s1221_S42) 37s 11s 20s 6s 524.3 MB 218% 954.1 MB 940.3 KB 0 bytes 948.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PICARD_COLLECTRNASEQMETRICS (rna_s1200_S21) 5m 58s 1s 5m 50s 7s 2.5 GB 103% 923.1 MB 713.4 KB 4.0 KB 700.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PICARD_COLLECTRNASEQMETRICS (rna_s1221_S42) 5m 15s 1s 5m 6s 8s 2.6 GB 104% 991.4 MB 713.9 KB 4.0 KB 700.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PRESEQ_LCEXTRAP (rna_s1200_S21) 1m 24s 2s 1m 18s 4s 202.3 MB 101% 853.7 MB 452.8 KB 0 bytes 460.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PRESEQ_LCEXTRAP (rna_s1221_S42) 1m 29s 2s 1m 24s 3s 172.5 MB 100% 922.0 MB 453.3 KB 0 bytes 460.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PRESEQ_TO_MULTIQC (rna_s1200_S21) 4s 2s 0s 1s 14.6 MB 102% 1.6 MB 1.1 KB 0 bytes 8.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:PRESEQ_TO_MULTIQC (rna_s1221_S42) 6s 4s 0s 1s 14.7 MB 103% 1.6 MB 1.1 KB 0 bytes 8.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_QC (rna_s1200_S21) 1m 54s 2s 1m 31s 20s 7.0 GB 302% 10.1 GB 699.2 MB 653.8 MB 83.3 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_QC (rna_s1221_S42) 2m 4s 2s 1m 37s 24s 7.0 GB 298% 10.4 GB 698.2 MB 856.6 MB 82.9 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_TO_MULTIQC (rna_s1200_S21) 5s 4s 0s 0s 13.3 MB 3450% 4.1 MB 5.7 KB 0 bytes 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_TO_MULTIQC (rna_s1221_S42) 2s 1s 0s 0s 14.5 MB 4282% 4.1 MB 5.7 KB 0 bytes 12.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (rna_s1200_S21) 6s 1s 0s 4s 17.6 MB 99% 26.0 MB 2.8 MB 0 bytes 2.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:QC_WORKFLOW:SEQTOOL_WHOLE_BAM_SATURATION (rna_s1221_S42) 8s 3s 0s 4s 17.5 MB 100% 24.9 MB 2.7 MB 0 bytes 2.7 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:RUN_LEVEL_INTERMEDIATE (run_level_qc) 3s 1s 0s 1s 3.4 MB 114% 1.2 MB 853 bytes 0 bytes 8.0 KB 1
93 items found |
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