succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:SAMTOOLS_INDEX_STAR_ALIGNMENT (rna_s1200_S21) 12s 2s 5s 5s 24.0 MB 165% 853.7 MB 2.4 MB 0 bytes 2.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:SAMTOOLS_INDEX_STAR_ALIGNMENT (rna_s1221_S42) 12s 2s 6s 4s 23.2 MB 165% 922.0 MB 2.4 MB 0 bytes 2.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:STAR_ALIGNMENT (rna_s1200_S21) 5m 20s 38s 3m 6s 1m 36s 35.6 GB 1174% 45.3 GB 9.0 GB 2.8 GB 8.9 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQ_ALIGN_STAR:STAR_ALIGNMENT (rna_s1221_S42) 5m 22s 38s 3m 10s 1m 34s 35.6 GB 1157% 46.3 GB 10.1 GB 2.8 GB 9.8 GB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQC (rna_s1200_S21) 1m 24s 10s 1m 9s 5s 477.1 MB 202% 1.4 GB 3.5 MB 0 bytes 3.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FASTQC (rna_s1221_S42) 1m 28s 16s 1m 6s 6s 498.1 MB 201% 1.4 GB 3.5 MB 0 bytes 3.8 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:AGAT_CONVERTSPGFF2TSV (rna_s1200_S21) 15s 11s 2s 2s 72.0 MB 100% 14.8 MB 1.7 MB 0 bytes 1.7 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:AGAT_CONVERTSPGFF2TSV (rna_s1221_S42) 5s 1s 2s 2s 71.4 MB 101% 17.6 MB 2.3 MB 0 bytes 2.3 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:ARRIBA_VISUALISATION (rna_s1200_S21) 1m 55s 21s 1m 26s 8s 2.3 GB 112% 1.4 GB 6.0 MB 0 bytes 6.0 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:ARRIBA_VISUALISATION (rna_s1221_S42) 1m 46s 1s 1m 39s 6s 2.3 GB 111% 1.5 GB 9.4 MB 0 bytes 9.4 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:FUSIONINSPECTOR (rna_s1200_S21) 11m 52s 50s 8m 54s 2m 7s 35.8 GB 242% 40.4 GB 3.6 GB 1.5 GB 80.2 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:FUSIONINSPECTOR (rna_s1221_S42) 12m 0s 50s 8m 59s 2m 10s 35.9 GB 238% 40.4 GB 3.7 GB 1.5 GB 89.1 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:VCF_COLLECT (rna_s1200_S21) 8s 5s 1s 2s 15.3 MB 1723% 33.0 MB 27.9 KB 0 bytes 36.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONINSPECTOR_WORKFLOW:VCF_COLLECT (rna_s1221_S42) 4s 1s 1s 2s 15.4 MB 1717% 33.4 MB 40.3 KB 0 bytes 48.0 KB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (rna_s1200_S21) 13s 8s 1s 3s 128.1 MB 789% 59.9 MB 13.7 MB 0 bytes 13.7 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:FUSIONREPORT_WORKFLOW:FUSIONREPORT (rna_s1221_S42) 14s 8s 2s 3s 127.6 MB 618% 66.1 MB 20.2 MB 0 bytes 20.3 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:GTF2BED (ref_annot.gtf) 30s 2s 18s 10s 3.1 GB 100% 1.3 GB 27.7 MB 4.0 KB 27.7 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_INDEX (Homo_sapiens.GRCh38.102.cdna.all.fa.gz) 3m 12s 3s 3m 2s 7s 2.7 GB 177% 1.7 GB 605.9 MB 0 bytes 605.9 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_QUANT (rna_s1200_S21) 2m 21s 39s 1m 33s 9s 1.4 GB 300% 1.6 GB 12.0 MB 1.5 GB 12.0 MB 1
succeeded NFCORE_RNAFUSION:RNAFUSION:KALLISTO_QUANT (rna_s1221_S42) 2m 24s 39s 1m 36s 9s 1.4 GB 298% 1.6 GB 12.0 MB 1.5 GB 12.0 MB 1
94 items found |
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