[W::hts_idx_load3] The index file is older than the data file: rna_s1221_S42.Aligned.sortedByCoord.out.bam.bai
Reading reference bed file:  ref_annot.bed  ...  Done
Load BAM file ...  Done

===================================================================
Total splicing  Events:	11219780
Known Splicing Events:	11135135
Partial Novel Splicing Events:	59248
Novel Splicing Events:	23159
Filtered Splicing Events:	2238

Total splicing  Junctions:	175854
Known Splicing Junctions:	148597
Partial Novel Splicing Junctions:	21832
Novel Splicing Junctions:	5425

===================================================================
Create BED file ...
Create Interact file ...